RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 UBXN4Q92575 508 aa11.52□□□□□ -0.56
RFC4-202ENST00000392481 CAPZA3Q96KX2 299 aa11.52□□□□□ -0.56
RFC4-202ENST00000392481 FCRL3Q96P31 734 aaPredicted RBP11.52□□□□□ -0.56
RFC4-202ENST00000392481 CCNL2Q96S94 520 aaPredicted RBP11.52□□□□□ -0.56
RFC4-202ENST00000392481 TCF12Q99081 682 aa11.52□□□□□ -0.56
RFC4-202ENST00000392481 RNF14Q9UBS8 474 aa11.52□□□□□ -0.56
RFC4-202ENST00000392481 ATRXP46100 2492 aa11.52□□□□□ -0.56
RFC4-202ENST00000392481 OR6C74A6NCV1 312 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 TLCD2A6NGC4 264 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 BHMG1C9JSJ3 638 aaPredicted RBP11.52□□□□□ -0.57
RFC4-202ENST00000392481 MATN2O00339 956 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 POLR1CO15160 346 aaPredicted RBP11.52□□□□□ -0.57
RFC4-202ENST00000392481 PFDN6O15212 129 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 NELFEP18615 380 aaKnown RBP11.52□□□□□ -0.57
RFC4-202ENST00000392481 RPS3P23396 243 aaKnown RBP eCLIP11.52□□□□□ -0.573e-9■■□□□ 11.4
RFC4-202ENST00000392481 CCR7P32248 378 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 ARCN1P48444 511 aaKnown RBP11.52□□□□□ -0.57
RFC4-202ENST00000392481 SEPHS1P49903 392 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 CXADRP78310 365 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 PTK6Q13882 451 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 BRD3Q15059 726 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 TYSND1Q2T9J0 566 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 ANKRD20A4Q4UJ75 823 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 DNTTIP2Q5QJE6 756 aaKnown RBP11.52□□□□□ -0.57
RFC4-202ENST00000392481 RNF187Q5TA31 235 aaPredicted RBP11.52□□□□□ -0.57
RFC4-202ENST00000392481 RNASEH2BQ5TBB1 312 aaKnown RBP11.52□□□□□ -0.57
RFC4-202ENST00000392481 PTRHD1Q6GMV3 140 aaKnown RBP11.52□□□□□ -0.57
RFC4-202ENST00000392481 SYDE1Q6ZW31 735 aaPredicted RBP11.52□□□□□ -0.57
RFC4-202ENST00000392481 GPR155Q7Z3F1 870 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 TMEM135Q86UB9 458 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 CARFQ8N187 725 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 OTUD6BQ8N6M0 293 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 PHC3Q8NDX5 983 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 OR4E2Q8NGC2 313 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 SNRNP27Q8WVK2 155 aaKnown RBP11.52□□□□□ -0.57
RFC4-202ENST00000392481 RUNDC3BQ96NL0 473 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 P2RY12Q9H244 342 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 SRMSQ9H3Y6 488 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 TFB2MQ9H5Q4 396 aaKnown RBP11.52□□□□□ -0.57
RFC4-202ENST00000392481 CPNE5Q9HCH3 593 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 ASIC3Q9UHC3 531 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 GNPTGQ9UJJ9 305 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 RALYQ9UKM9 306 aaKnown RBP11.52□□□□□ -0.57
RFC4-202ENST00000392481 ASF1AQ9Y294 204 aa11.52□□□□□ -0.57
RFC4-202ENST00000392481 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.52□□□□□ -0.57
RFC4-202ENST00000392481 IGHV5-51A0A0C4DH38 117 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 FANCGO15287 622 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 GPC4O75487 556 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 APOA4P06727 396 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 ITGB6P18564 788 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 AOAHP28039 575 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 PAFAH1B1P43034 410 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 PTGIRP43119 386 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 FOXM1Q08050 763 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 VAC14Q08AM6 782 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 HSPA14Q0VDF9 509 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 PRKAA1Q13131 559 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 IL11RAQ14626 422 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 NEPROQ6NW34 567 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 NAPRTQ6XQN6 538 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 PCGF5Q86SE9 256 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 HOOK3Q86VS8 718 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 KMT5CQ86Y97 462 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 TBC1D21Q8IYX1 336 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 SLC22A15Q8IZD6 547 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 OR52E1Q8NGJ3 308 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 LKAAEAR1Q8TD35 194 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 SLC41A2Q96JW4 573 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 SIGLEC10Q96LC7 697 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 PANX3Q96QZ0 392 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 MAP3K3Q99759 626 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 CTRCQ99895 268 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 HGH1Q9BTY7 390 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 SPRY4Q9C004 299 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 TRIT1Q9H3H1 467 aaKnown RBP11.51□□□□□ -0.57
RFC4-202ENST00000392481 APMAPQ9HDC9 416 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 POLG2Q9UHN1 485 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 CDYLQ9Y232 598 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 VPS9D1Q9Y2B5 631 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 RPS6KL1Q9Y6S9 549 aa11.51□□□□□ -0.57
RFC4-202ENST00000392481 CFAP46Q8IYW2 2715 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 TEX51A0A1B0GUA7 166 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 UBA6A0AVT1 1052 aaPredicted RBP11.5□□□□□ -0.57
RFC4-202ENST00000392481 IQCF5A8MTL0 148 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 GOLGA8KD6RF30 607 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 GOLGA8TH3BQL2 631 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 CCDC188H7C350 402 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 K7ENP7 123 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 DNALI1O14645 258 aaPredicted RBP11.5□□□□□ -0.57
RFC4-202ENST00000392481 KPNA5O15131 536 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 USP1O94782 785 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 SLCO2B1O94956 709 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 POLR2CP19387 275 aaPredicted RBP11.5□□□□□ -0.57
RFC4-202ENST00000392481 OGNP20774 298 aaKnown RBP11.5□□□□□ -0.57
RFC4-202ENST00000392481 IVDP26440 423 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 ATP1A2P50993 1020 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 ADARP55265 1226 aaKnown RBP11.5□□□□□ -0.57
RFC4-202ENST00000392481 EIF3BP55884 814 aaKnown RBP11.5□□□□□ -0.57
RFC4-202ENST00000392481 SH3BP2P78314 561 aa11.5□□□□□ -0.57
RFC4-202ENST00000392481 DR1Q01658 176 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms