RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 ARL15Q9NXU5 204 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 EBF1Q9UH73 591 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 ZNF225Q9UK10 706 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 PTBP2Q9UKA9 531 aaKnown RBP11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 SCML1Q9UN30 329 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 G3BP2Q9UN86 482 aaKnown RBP11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 NCKAP1Q9Y2A7 1128 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 PTGDR2Q9Y5Y4 395 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 KRBA1A5PL33 1030 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 ANKRD33BA6NCL7 494 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 A8MUI8 341 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 CCNT2O60583 730 aaKnown RBP11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 POP7O75817 140 aaKnown RBP11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 KRT16P08779 473 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 MPC1LP0DKB6 136 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 T-ENOLP0DO92 83 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 NCF2P19878 526 aaPredicted RBP11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 CLNS1AP54105 237 aaKnown RBP11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 RIPK1Q13546 671 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 NFE2L1Q14494 772 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 AGERQ15109 404 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 ZXDCQ2QGD7 858 aaPredicted RBP11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 LSM12Q3MHD2 195 aaKnown RBP11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 ZNF658BQ4V348 819 aaPredicted RBP11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 KIAA1161Q6NSJ0 714 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 C11orf96Q7Z7L8 435 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 SYVN1Q86TM6 617 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 PGBD3Q8N328 593 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 OR52B6Q8NGF0 335 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 AGAP11Q8TF27 550 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 MSANTD3Q96H12 275 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 C1QTNF3Q9BXJ4 246 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 SLC12A9Q9BXP2 914 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 EPHX3Q9H6B9 360 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 WDR26Q9H7D7 661 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 TCF7L2Q9NQB0 619 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 ARHGEF3Q9NR81 526 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 ARL8BQ9NVJ2 186 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 WWOXQ9NZC7 414 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 VTI1BQ9UEU0 232 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 FZD4Q9ULV1 537 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 CA5BQ9Y2D0 317 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 TIMM22Q9Y584 194 aa11.93□□□□□ -0.5
SPTBN1-203ENST00000389980 GFYI3L273 518 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 EIF3FO00303 357 aaPredicted RBP11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 MAN2B1O00754 1011 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 VEGFDO43915 354 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 MGRN1O60291 552 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 UNC5CO95185 931 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 C8GP07360 202 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 IGFALSP35858 605 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 GAS6Q14393 721 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 UBXN2BQ14CS0 331 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 PCBP2Q15366 365 aaKnown RBP eCLIP11.92□□□□□ -0.51e-6■■□□□ 13.1
SPTBN1-203ENST00000389980 UGT3A2Q3SY77 523 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 CCSMST1Q4G0I0 132 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 SPDYAQ5MJ70 313 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 TMEM198Q66K66 360 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 NXNQ6DKJ4 435 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 FAM83HQ6ZRV2 1179 aaPredicted RBP11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 USP30Q70CQ3 517 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 GOLGA7Q7Z5G4 137 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 KBTBD6Q86V97 674 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 TREML1Q86YW5 311 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 ZNF687Q8N1G0 1237 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 TEX9Q8N6V9 391 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 SH3GL3Q99963 347 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 TEX101Q9BY14 249 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 FOXQ1Q9C009 403 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 STN1Q9H668 368 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 NOL11Q9H8H0 719 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 RDH14Q9HBH5 336 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 PARVBQ9HBI1 364 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 PREBQ9HCU5 417 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 SLC23A2Q9UGH3 650 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 TMCO1Q9UM00 188 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 LAMA1P25391 3075 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 ARHGEF33A8MVX0 844 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 SLCO1B7G3V0H7 640 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 SDHDO14521 159 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 AZIN1O14977 448 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 SCAMP1O15126 338 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 SNUPNO95149 360 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 MATN4O95460 622 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 FUCA1P04066 466 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 SERPINA6P08185 405 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 TRIM23P36406 574 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 ARL1P40616 181 aaPredicted RBP11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 BDKRB1P46663 353 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 CLDN2P57739 230 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 GTF2H2Q13888 395 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 SULT1C3Q6IMI6 304 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 ANO7Q6IWH7 933 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 GTF2H2CQ6P1K8 395 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 ASRGL1Q7L266 308 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 GLMNQ92990 594 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 MARK4Q96L34 752 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 SAR1AQ9NR31 198 aa11.92□□□□□ -0.5
SPTBN1-203ENST00000389980 ZNHIT2Q9UHR6 403 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms