RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 CRADDP78560 199 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 FOXM1Q08050 763 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 IFFO1Q0D2I5 559 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 KCNAB2Q13303 367 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 SQSTM1Q13501 440 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 CRYMQ14894 314 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 KIR2DS5Q14953 304 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 KLHL38Q2WGJ6 581 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 IYDQ6PHW0 289 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 WDR74Q6RFH5 385 aaPredicted RBP13.48□□□□□ -0.25
PRPF18-202ENST00000378572 UNC5BQ8IZJ1 945 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 AVL9Q8NBF6 648 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 CFAP36Q96G28 342 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 LYSMD1Q96S90 227 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 SRPK1Q96SB4 655 aaKnown RBP13.48□□□□□ -0.25
PRPF18-202ENST00000378572 GPR63Q9BZJ6 419 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 ZFYVE1Q9HBF4 777 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 PRDM8Q9NQV8 689 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 GEMIN8Q9NWZ8 242 aaKnown RBP13.48□□□□□ -0.25
PRPF18-202ENST00000378572 MOCS1Q9NZB8 636 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 HACD3Q9P035 362 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 ATXN10Q9UBB4 475 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 CPNE7Q9UBL6 633 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 CNOT6Q9ULM6 557 aaKnown RBP13.48□□□□□ -0.25
PRPF18-202ENST00000378572 DNAJC16Q9Y2G8 782 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 RPS6KL1Q9Y6S9 549 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 FAM169AQ9Y6X4 670 aa13.48□□□□□ -0.25
PRPF18-202ENST00000378572 RGSL1A5PLK6 1076 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 NUAK1O60285 661 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 VIPP01282 170 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 C1QAP02745 245 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 SHBGP04278 402 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 ZNF8P17098 575 aaPredicted RBP13.47□□□□□ -0.25
PRPF18-202ENST00000378572 ITGB6P18564 788 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 EPHA4P54764 986 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 ZNF844Q08AG5 666 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 GPS2Q13227 327 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 POU6F1Q14863 301 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 RASA2Q15283 850 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 ANKRD20A4Q4UJ75 823 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 MTERF4Q7Z6M4 381 aaKnown RBP13.47□□□□□ -0.25
PRPF18-202ENST00000378572 RAVER1Q8IY67 606 aaKnown RBP13.47□□□□□ -0.25
PRPF18-202ENST00000378572 BRSK1Q8TDC3 778 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 CYTH2Q99418 400 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 SH3GL2Q99962 352 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 ZCWPW2A0A1B0GU75 182 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 MROH6A6NGR9 719 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 OR5K4A6NMS3 321 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 POLR1CO15160 346 aaPredicted RBP13.47□□□□□ -0.25
PRPF18-202ENST00000378572 CAPN5O15484 640 aaPredicted RBP13.47□□□□□ -0.25
PRPF18-202ENST00000378572 RASSF9O75901 435 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 STK17BO94768 372 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 TYRP1P17643 537 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 AMD1P17707 334 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 MAP4P27816 1152 aaKnown RBP13.47□□□□□ -0.25
PRPF18-202ENST00000378572 MC2RQ01718 297 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 CEP85LQ5SZL2 805 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 C16orf46Q6P387 395 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 TDRPQ86YL5 185 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 PLXDC1Q8IUK5 500 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 CNPY4Q8N129 248 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 RIBC1Q8N443 379 aaPredicted RBP13.47□□□□□ -0.25
PRPF18-202ENST00000378572 BMPERQ8N8U9 685 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 OR2W6PQ8NHA6 318 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 GDAP1Q8TB36 358 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 FBF1Q8TES7 1133 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 ZNF669Q96BR6 464 aaPredicted RBP13.47□□□□□ -0.25
PRPF18-202ENST00000378572 CATSPER2Q96P56 530 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 TGM7Q96PF1 710 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 C19orf43Q9BQ61 176 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 ZPBPQ9BS86 351 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 ZSCAN5AQ9BUG6 496 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 EFHD1Q9BUP0 239 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 ADNPQ9H2P0 1102 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 EPB41L1Q9H4G0 881 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 TRABDQ9H4I3 376 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 APMAPQ9HDC9 416 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 CHRAC1Q9NRG0 131 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 RAD18Q9NS91 495 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 TREX1Q9NSU2 369 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 SLC24A2Q9UI40 661 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 ZNF711Q9Y462 761 aa13.47□□□□□ -0.25
PRPF18-202ENST00000378572 TLN1Q9Y490 2541 aaKnown RBP13.46□□□□□ -0.25
PRPF18-202ENST00000378572 EXOC1LA0A1B0GW35 172 aa13.46□□□□□ -0.25
PRPF18-202ENST00000378572 FAM159BA6NKW6 160 aa13.46□□□□□ -0.25
PRPF18-202ENST00000378572 NKX2-8O15522 239 aa13.46□□□□□ -0.25
PRPF18-202ENST00000378572 SUV39H1O43463 412 aa13.46□□□□□ -0.25
PRPF18-202ENST00000378572 LDB2O43679 373 aa13.46□□□□□ -0.25
PRPF18-202ENST00000378572 PSMA3P25788 255 aa13.46□□□□□ -0.25
PRPF18-202ENST00000378572 SEPHS1P49903 392 aa13.46□□□□□ -0.25
PRPF18-202ENST00000378572 GFERP55789 205 aa13.46□□□□□ -0.25
PRPF18-202ENST00000378572 ACVR1Q04771 509 aa13.46□□□□□ -0.25
PRPF18-202ENST00000378572 NAB1Q13506 487 aa13.46□□□□□ -0.25
PRPF18-202ENST00000378572 GTF2H3Q13889 308 aa13.46□□□□□ -0.25
PRPF18-202ENST00000378572 KIAA0930Q6ICG6 404 aaPredicted RBP13.46□□□□□ -0.25
PRPF18-202ENST00000378572 CAPN12Q6ZSI9 719 aa13.46□□□□□ -0.25
PRPF18-202ENST00000378572 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.46□□□□□ -0.25
PRPF18-202ENST00000378572 UHMK1Q8TAS1 419 aaKnown RBP13.46□□□□□ -0.25
PRPF18-202ENST00000378572 COL26A1Q96A83 441 aa13.46□□□□□ -0.25
PRPF18-202ENST00000378572 MAGEE1Q9HCI5 957 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms