RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 SSR3Q9UNL2 185 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 MRPS33Q9Y291 106 aaKnown RBP14.8□□□□□ -0.04
NPHP4-201ENST00000378156 NWD2Q9ULI1 1742 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 CCNDBP1O95273 360 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 FGF3P11487 239 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-201ENST00000378156 CCR10P46092 362 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 ECT2LQ008S8 904 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 SEMG2Q02383 582 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 GPR33Q49SQ1 333 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 RBM20Q5T481 1227 aaKnown RBP14.8□□□□□ -0.04
NPHP4-201ENST00000378156 SLCO6A1Q86UG4 719 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 PARGQ86W56 976 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 PRR11Q96HE9 360 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-201ENST00000378156 ZNF607Q96SK3 696 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 DNAJB4Q9UDY4 337 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 AHDC1Q5TGY3 1603 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-201ENST00000378156 IGKV6D-21A0A0A0MT36 114 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 A8MT66 165 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 OR6A2O95222 327 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 ZBTB11O95625 1053 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-201ENST00000378156 VIPP01282 170 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 ALDOAP04075 364 aaKnown RBP14.8□□□□□ -0.04
NPHP4-201ENST00000378156 PCCBP05166 539 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 HAPLN1P10915 354 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-201ENST00000378156 ZNF12P17014 697 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 GALNT2Q10471 571 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 GPM6BQ13491 265 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 CCNYL2Q5T2Q4 361 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 SLC7A6OSQ96CW6 309 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-201ENST00000378156 SLC47A1Q96FL8 570 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 GPR22Q99680 433 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 CCDC59Q9P031 241 aaKnown RBP14.8□□□□□ -0.04
NPHP4-201ENST00000378156 ZNF37AP17032 561 aaPredicted RBP14.79□□□□□ -0.04
NPHP4-201ENST00000378156 MAGEA11P43364 429 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 TYSND1Q2T9J0 566 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.79□□□□□ -0.04
NPHP4-201ENST00000378156 SNX20Q7Z614 316 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 OR4A15Q8NGL6 344 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 MUC13Q9H3R2 512 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 TRBV23OR9-2A0A075B6M9 112 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 G3V2T6 193 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 FAM72CH0Y354 149 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 ZNF623O75123 536 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 FAM72AQ5TYM5 149 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 FAM72DQ6L9T8 149 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 EPGNQ6UW88 154 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 AGMOQ6ZNB7 445 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 RPS27LQ71UM5 84 aaKnown RBP14.79□□□□□ -0.04
NPHP4-201ENST00000378156 FAM72BQ86X60 149 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 FAM20CQ8IXL6 584 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 SRFBP1Q8NEF9 429 aaKnown RBP14.79□□□□□ -0.04
NPHP4-201ENST00000378156 SLC22A17Q8WUG5 538 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 HERVK_113Q902F9 699 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 SLC39A3Q9BRY0 314 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 C3orf14Q9HBI5 128 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 CCDC177Q9NQR7 707 aaPredicted RBP14.79□□□□□ -0.04
NPHP4-201ENST00000378156 ADAMTS5Q9UNA0 930 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 LRRC42Q9Y546 428 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 BIKQ13323 160 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 LRRC73Q5JTD7 316 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 ARMCX6Q7L4S7 300 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 CYP2S1Q96SQ9 504 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 GAS2L1Q99501 681 aaPredicted RBP14.79□□□□□ -0.04
NPHP4-201ENST00000378156 ADI1Q9BV57 179 aa14.79□□□□□ -0.04
NPHP4-201ENST00000378156 CCNKO75909 580 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 C8GP07360 202 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 ANXA4P09525 319 aaPredicted RBP14.78□□□□□ -0.04
NPHP4-201ENST00000378156 CKMT2P17540 419 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 GSCP56915 257 aaPredicted RBP14.78□□□□□ -0.04
NPHP4-201ENST00000378156 PUDPQ08623 228 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 ZFP69Q49AA0 526 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 C9orf64Q5T6V5 341 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 PEG10Q86TG7 708 aaKnown RBP14.78□□□□□ -0.04
NPHP4-201ENST00000378156 ZNF280BQ86YH2 543 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 RAD51AP1Q96B01 352 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 SLC38A2Q96QD8 506 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 ADAMTS10Q9H324 1103 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 CREBZFQ9NS37 354 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 EVA1BQ9NVM1 165 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 RAB23Q9ULC3 237 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 DHFRP00374 187 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 GMPRP36959 345 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 MTHFRP42898 656 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 PLET1Q6UQ28 207 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 ROPN1LQ96C74 230 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 C1orf21Q9H246 121 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 AP3D1O14617 1153 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 PRKCGP05129 697 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 NR2F6P10588 404 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 UGT1A6P19224 532 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 UGT1A1P22309 533 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 UGT1A4P22310 534 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 UGT1A3P35503 534 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 UGT1A5P35504 534 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 GJA8P48165 433 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 ZNF33AQ06730 810 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 ILF3Q12906 894 aaKnown RBP eCLIP14.78□□□□□ -0.044e-7■■■■□ 25.5
NPHP4-201ENST00000378156 SIRPB2Q5JXA9 342 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 MED27Q6P2C8 311 aa14.78□□□□□ -0.04
NPHP4-201ENST00000378156 PAQR3Q6TCH7 311 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms