RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 ITGA5P08648 1049 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 CYP2C18P33260 490 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 CDK9P50750 372 aaKnown RBP16.09■□□□□ 0.17
RGP1-201ENST00000378078 OLFML1Q6UWY5 402 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 RANBP3LQ86VV4 465 aaPredicted RBP16.09■□□□□ 0.17
RGP1-201ENST00000378078 ADAP2Q9NPF8 381 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 HPF1Q9NWY4 346 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 NMBRP28336 390 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 MLLT10P55197 1068 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 KCNJ2P63252 427 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 CACNG1Q06432 222 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 ZNF234Q14588 700 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 SLC29A4Q7RTT9 530 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 TLX3O43711 291 aaPredicted RBP16.09■□□□□ 0.17
RGP1-201ENST00000378078 MAFKO60675 156 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 C8AP07357 584 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 INHBEP58166 350 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 ELP6Q0PNE2 266 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 BNIP3Q12983 259 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 ARFRP1Q13795 201 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 UNC93AQ86WB7 457 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 ZNF350Q9GZX5 532 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 ASTN1O14525 1302 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 SLC38A8A6NNN8 435 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 CFL1P23528 166 aaKnown RBP16.09■□□□□ 0.17
RGP1-201ENST00000378078 MAP3K8P41279 467 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 TTLL10Q6ZVT0 673 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 MON1AQ86VX9 555 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 NXPE1Q8N323 547 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 EPS8L1Q8TE68 723 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 VCPIP1Q96JH7 1222 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 ARHGEF4Q9NR80 690 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 FKBP14Q9NWM8 211 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 SSX5O60225 188 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 WFS1O76024 890 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 GBAP04062 536 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 JMJD7P0C870 316 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 CHIT1Q13231 466 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 C1orf186Q6ZWK4 172 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 ATXN2LQ8WWM7 1075 aaKnown RBP16.09■□□□□ 0.17
RGP1-201ENST00000378078 PNPLA8Q9NP80 782 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 ENY2Q9NPA8 101 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 FBXO5Q9UKT4 447 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 BCORL1Q5H9F3 1711 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 ABCA6Q8N139 1617 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 PRNPP04156 253 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 FGF1P05230 155 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 PTDSS1P48651 473 aaKnown RBP16.09■□□□□ 0.17
RGP1-201ENST00000378078 SRYQ05066 204 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 TARDBPQ13148 414 aaKnown RBP eCLIP16.09■□□□□ 0.17
RGP1-201ENST00000378078 TMEM126BQ8IUX1 230 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 GSTCDQ8NEC7 633 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 PPP1R14BQ96C90 147 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 KCNC2Q96PR1 638 aa16.09■□□□□ 0.17
RGP1-201ENST00000378078 ALPIP09923 528 aa16.08■□□□□ 0.17
RGP1-201ENST00000378078 MAGEA12P43365 314 aa16.08■□□□□ 0.17
RGP1-201ENST00000378078 ELF3P78545 371 aaPredicted RBP16.08■□□□□ 0.17
RGP1-201ENST00000378078 BTN2A3PQ96KV6 586 aa16.08■□□□□ 0.17
RGP1-201ENST00000378078 TMED9Q9BVK6 235 aa16.08■□□□□ 0.17
RGP1-201ENST00000378078 LGR4Q9BXB1 951 aa16.08■□□□□ 0.17
RGP1-201ENST00000378078 SLCO1B3Q9NPD5 702 aa16.08■□□□□ 0.17
RGP1-201ENST00000378078 ZNF69Q9UC07 566 aa16.08■□□□□ 0.17
RGP1-201ENST00000378078 CA14Q9ULX7 337 aa16.08■□□□□ 0.17
RGP1-201ENST00000378078 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.08■□□□□ 0.17
RGP1-201ENST00000378078 CDC7O00311 574 aa16.08■□□□□ 0.17
RGP1-201ENST00000378078 OR3A3P47888 321 aa16.08■□□□□ 0.17
RGP1-201ENST00000378078 OR3A2P47893 321 aa16.08■□□□□ 0.17
RGP1-201ENST00000378078 ZNF101Q8IZC7 436 aa16.08■□□□□ 0.17
RGP1-201ENST00000378078 TRPV1Q8NER1 839 aa16.08■□□□□ 0.17
RGP1-201ENST00000378078 PPTC7Q8NI37 304 aa16.08■□□□□ 0.17
RGP1-201ENST00000378078 DOK4Q8TEW6 326 aa16.08■□□□□ 0.17
RGP1-201ENST00000378078 SLC35G5Q96KT7 338 aa16.08■□□□□ 0.17
RGP1-201ENST00000378078 MRPS17Q9Y2R5 130 aaKnown RBP16.08■□□□□ 0.17
RGP1-201ENST00000378078 RAP2CQ9Y3L5 183 aa16.08■□□□□ 0.17
RGP1-201ENST00000378078 TEX46H3BTG2 121 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 TSPAN4O14817 238 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 CH25HO95992 272 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 TUBG1P23258 451 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 FMO3P31513 532 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 OR12D2P58182 307 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 SEMA3AQ14563 771 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 AKAP14Q86UN6 197 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 ZSCAN1Q8NBB4 408 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 ADAD1Q96M93 576 aaKnown RBP16.08■□□□□ 0.16
RGP1-201ENST00000378078 AIFM2Q9BRQ8 373 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 FEM1AQ9BSK4 669 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.08■□□□□ 0.164e-6■■■■■ 27
RGP1-201ENST00000378078 GDF3Q9NR23 364 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 EIF3KQ9UBQ5 218 aaKnown RBP16.08■□□□□ 0.16
RGP1-201ENST00000378078 PCDHGB5Q9Y5G0 923 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 NCOA3Q9Y6Q9 1424 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 WASHC1A8K0Z3 465 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 WASH3PC4AMC7 463 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 LHCGRP22888 699 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 PRAMEF17Q5VTA0 474 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 WASH2PQ6VEQ5 465 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 TCEANCQ8N8B7 351 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 GATSQ8NAP1 163 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 PLA2G15Q8NCC3 412 aa16.08■□□□□ 0.16
RGP1-201ENST00000378078 PSMG2Q969U7 264 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms