RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 C8GP07360 202 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 YES1P07947 543 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 PMS2P3Q13401 168 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 PPP1R3AQ16821 1122 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 KBTBD7Q8WVZ9 684 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 MUS81Q96NY9 551 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 ADAM2Q99965 735 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 FNDC11Q9BVV2 318 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 BRD9Q9H8M2 597 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 MARCH7Q9H992 704 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 CLCA2Q9UQC9 943 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 ERVK-11Q9UQG0 969 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 ARL5AQ9Y689 179 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 SPACA6W5XKT8 324 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 NBNO60934 754 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 SNAP29O95721 258 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 CLTBP09497 229 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 ITIH1P19827 911 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 SPAM1P38567 509 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 CCT3P49368 545 aaKnown RBP8.63□□□□□ -1.03
PCDH9-202ENST00000377865 NUMBP49757 651 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 C6orf141Q5SZD1 244 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 BHLHB9Q6PI77 547 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 FGD2Q7Z6J4 655 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 NCSTNQ92542 709 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 DIRAS2Q96HU8 199 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 COPS8Q99627 209 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 MINDY3Q9H8M7 445 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 ZNF282Q9UDV7 671 aaPredicted RBP8.63□□□□□ -1.03
PCDH9-202ENST00000377865 NRAPQ86VF7 1730 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 hCG_2039718K7EN88 272 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 PRKD3O94806 890 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 SORBS2O94875 1100 aaKnown RBP8.63□□□□□ -1.03
PCDH9-202ENST00000377865 INMTO95050 263 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 CD72P21854 359 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 CDKL1Q00532 357 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 MS4A2Q01362 244 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 DDI2Q5TDH0 399 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 NUDT18Q6ZVK8 323 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 GALNT13Q8IUC8 556 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 DENND1CQ8IV53 801 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 SLC15A3Q8IY34 581 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 LPPQ93052 612 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 APOLD1Q96LR9 279 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 SLITRK2Q9H156 845 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 KLHL1Q9NR64 748 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 AIG1Q9NVV5 245 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 IGKV6D-21A0A0A0MT36 114 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 ILVBLA1L0T0 632 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 SLC30A4O14863 429 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 ACOX3O15254 700 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 WBP4O75554 376 aaKnown RBP8.63□□□□□ -1.03
PCDH9-202ENST00000377865 SIX3O95343 332 aaPredicted RBP8.63□□□□□ -1.03
PCDH9-202ENST00000377865 C9P02748 559 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 F7P08709 466 aaPredicted RBP8.63□□□□□ -1.03
PCDH9-202ENST00000377865 HSPA14Q0VDF9 509 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 OLIG2Q13516 323 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 IRAK1BP1Q5VVH5 260 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 DOK6Q6PKX4 331 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 BLOC1S3Q6QNY0 202 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 SLC51AQ86UW1 340 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 CARM1Q86X55 608 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 CPNE9Q8IYJ1 553 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 GAB3Q8WWW8 586 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 TFAP2CQ92754 450 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 PSMG2Q969U7 264 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 HTATIP2Q9BUP3 242 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 PDGFDQ9GZP0 370 aaPredicted RBP8.63□□□□□ -1.03
PCDH9-202ENST00000377865 SMOC2Q9H3U7 446 aa8.63□□□□□ -1.03
PCDH9-202ENST00000377865 GRXCR2A6NFK2 248 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 CASKO14936 926 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 VILLO15195 856 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 CREG1O75629 220 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 UGT2B17O75795 530 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 CD1DP15813 335 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 INHBCP55103 352 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 RABL3Q5HYI8 236 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 NANOGP8Q6NSW7 305 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 XKRXQ6PP77 449 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 PAQR3Q6TCH7 311 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 HDDC2Q7Z4H3 204 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 ARFGAP1Q8N6T3 406 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 ARRDC4Q8NCT1 418 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 TIFAQ96CG3 184 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 COL21A1Q96P44 957 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 BBS4Q96RK4 519 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 KCNS3Q9BQ31 491 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 NANOGQ9H9S0 305 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 ZFYVE1Q9HBF4 777 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 PTGFRNQ9P2B2 879 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 CARD8Q9Y2G2 431 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 ADM5C9JUS6 153 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 CCL22O00626 93 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 TFECO14948 347 aaPredicted RBP8.62□□□□□ -1.03
PCDH9-202ENST00000377865 TBL1XO60907 577 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 IFNW1P05000 195 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 TFPTP0C1Z6 253 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 PTSQ03393 145 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 UNC50Q53HI1 259 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 KIAA1614Q5VZ46 1190 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms