RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 RFWD3Q6PCD5 774 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 EFCAB11Q9BUY7 163 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 ZFYVE1Q9HBF4 777 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 IFT52Q9Y366 437 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 DGKBQ9Y6T7 804 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 SLC25A12O75746 678 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 IL7P13232 177 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 CACNB2Q08289 660 aaPredicted RBP10.04□□□□□ -0.8
PTCH1-204ENST00000375290 GRHL2Q6ISB3 625 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 ARRDC4Q8NCT1 418 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 CCDC106Q9BWC9 280 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 SPG21Q9NZD8 308 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 FLRT1Q9NZU1 646 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 PCDHB3Q9Y5E6 796 aa10.04□□□□□ -0.8
PTCH1-204ENST00000375290 EPORP19235 508 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 LCN1P31025 176 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 ZFP57Q9NU63 452 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 OGDHLQ9ULD0 1010 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 RNF6Q9Y252 685 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 A0A1B0GVC2 190 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 PTPN5P54829 565 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 ALFQ53S48 1182 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 FAM46CQ5VWP2 391 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 ANKRD26P1Q6NSI1 321 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 SDR16C5Q8N3Y7 309 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 DENND1AQ8TEH3 1009 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 AP2M1Q96CW1 435 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 GTF2A1LQ9UNN4 478 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 SMIM35A0A1B0GVV1 85 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 RECQL4O94761 1208 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 THOP1P52888 689 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 ARSFP54793 590 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 SYVN1Q86TM6 617 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 CGREF1Q99674 301 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 PPEF2O14830 753 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 USP17L7P0C7H9 530 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 AMHR2Q16671 573 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 SLC22A10Q63ZE4 541 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 CYP2W1Q8TAV3 490 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 OR52B2Q96RD2 323 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 WDR55Q9H6Y2 383 aaPredicted RBP10.03□□□□□ -0.8
PTCH1-204ENST00000375290 KAT6AQ92794 2004 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 RLN1P04808 185 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 UBA1P22314 1058 aaKnown RBP10.03□□□□□ -0.8
PTCH1-204ENST00000375290 CCNIQ14094 377 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 ZMYND11Q15326 602 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 ANKRD23Q86SG2 305 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 SENP8Q96LD8 212 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 TMEM39BQ9GZU3 492 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 RIMS1Q86UR5 1692 aaKnown RBP10.03□□□□□ -0.8
PTCH1-204ENST00000375290 RNF225M0QZC1 329 aaPredicted RBP10.03□□□□□ -0.8
PTCH1-204ENST00000375290 HCN1O60741 890 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 KCNC4Q03721 635 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 CTBP1Q13363 440 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 CAPSQ13938 189 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 TSTD2Q5T7W7 516 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 C17orf64Q86WR6 236 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 CFAP206Q8IYR0 622 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 SPPL2BQ8TCT7 592 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 TAS2R8Q9NYW2 309 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 CDH7Q9ULB5 785 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 PPM1HQ9ULR3 514 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 SLC27A6Q9Y2P4 619 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 TTLL13PA6NNM8 815 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 H3BSA7 217 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 BUD31P41223 144 aaPredicted RBP10.03□□□□□ -0.8
PTCH1-204ENST00000375290 EMX2Q04743 252 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 ATG9BQ674R7 924 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 FAM46DQ8NEK8 389 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 OR52K2Q8NGK3 314 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 FUBP3Q96I24 572 aaKnown RBP eCLIP10.03□□□□□ -0.8
PTCH1-204ENST00000375290 HERC2P3Q9BVR0 1158 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 CMAHPQ9Y471 501 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 EIF1AYO14602 144 aaKnown RBP10.03□□□□□ -0.8
PTCH1-204ENST00000375290 PRODHO43272 600 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 NME6O75414 186 aaPredicted RBP10.03□□□□□ -0.8
PTCH1-204ENST00000375290 LINGO3P0C6S8 592 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 EIF1AXP47813 144 aaKnown RBP10.03□□□□□ -0.8
PTCH1-204ENST00000375290 CYP4F2P78329 520 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 ZNF630Q2M218 657 aaPredicted RBP10.03□□□□□ -0.8
PTCH1-204ENST00000375290 IL23RQ5VWK5 629 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 ZCCHC12Q6PEW1 402 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 CELF6Q96J87 481 aaKnown RBP10.03□□□□□ -0.8
PTCH1-204ENST00000375290 DNAJC5BQ9UF47 199 aa10.03□□□□□ -0.8
PTCH1-204ENST00000375290 ARPC4-TTLL3A0A0A6YYG9 625 aa10.02□□□□□ -0.8
PTCH1-204ENST00000375290 CXCR3P49682 368 aa10.02□□□□□ -0.8
PTCH1-204ENST00000375290 RAB5BP61020 215 aa10.02□□□□□ -0.8
PTCH1-204ENST00000375290 SGCGQ13326 291 aa10.02□□□□□ -0.8
PTCH1-204ENST00000375290 CLEC10AQ8IUN9 316 aa10.02□□□□□ -0.8
PTCH1-204ENST00000375290 PPTC7Q8NI37 304 aa10.02□□□□□ -0.8
PTCH1-204ENST00000375290 CDT1Q9H211 546 aa10.02□□□□□ -0.8
PTCH1-204ENST00000375290 SALL4Q9UJQ4 1053 aa10.02□□□□□ -0.8
PTCH1-204ENST00000375290 MRPS7Q9Y2R9 242 aaKnown RBP10.02□□□□□ -0.8
PTCH1-204ENST00000375290 PRAF2O60831 178 aa10.02□□□□□ -0.8
PTCH1-204ENST00000375290 S100A2P29034 98 aa10.02□□□□□ -0.8
PTCH1-204ENST00000375290 APLP1P51693 650 aa10.02□□□□□ -0.8
PTCH1-204ENST00000375290 RPS14P62263 151 aaKnown RBP10.02□□□□□ -0.8
PTCH1-204ENST00000375290 FADDQ13158 208 aa10.02□□□□□ -0.8
PTCH1-204ENST00000375290 ZNF234Q14588 700 aa10.02□□□□□ -0.8
PTCH1-204ENST00000375290 C3orf67Q6ZVT6 689 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms