RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 MIPEPQ99797 713 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 EFCAB11Q9BUY7 163 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 PCBD2Q9H0N5 130 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 GKN1Q9NS71 199 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 STX16-NPEPL1H3BU86 382 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 STX16O14662 325 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 NBNO60934 754 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 FYNP06241 537 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 NEK5Q6P3R8 708 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 CDHR3Q6ZTQ4 885 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 TUBGCP5Q96RT8 1024 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 ITM2CQ9NQX7 267 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 OR10H1Q9Y4A9 318 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 SAGE2PA6NJ88 616 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 TMEM233B4DJY2 109 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 GSK3BP49841 420 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 IFI44LQ53G44 452 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 KLHL17Q6TDP4 642 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 KIAA1324Q6UXG2 1013 aaKnown RBP19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 SATL1Q86VE3 508 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 TREML1Q86YW5 311 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 MCCC1Q96RQ3 725 aaPredicted RBP19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 LMAN2LQ9H0V9 348 aa19.22■□□□□ 0.67
TGFBR1-201ENST00000374990 ARPC2O15144 300 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 VARSP26640 1264 aaKnown RBP19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 CAP1Q01518 475 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 ADGRG6Q86SQ4 1221 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 KREMEN2Q8NCW0 462 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 KCNJ9Q92806 393 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 DUSP26Q9BV47 211 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 SLC32A1Q9H598 525 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 ERVW-1Q9UQF0 538 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 DCLK1O15075 740 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 LGALS3BPQ08380 585 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 KHDRBS2Q5VWX1 349 aaKnown RBP19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 STEAP4Q687X5 459 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 OR2AP1Q8NGE2 309 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 TOR4AQ9NXH8 423 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 FADS2O95864 444 aaKnown RBP19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 NPPAP01160 153 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 CSKP41240 450 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 TMEM220Q6QAJ8 160 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 SMYD1Q8NB12 490 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 HERPUD2Q9BSE4 406 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 CNOT6Q9ULM6 557 aaKnown RBP19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 KCNQ1P51787 676 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 RING1Q06587 406 aa19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 TTC29Q8NA56 475 aaPredicted RBP19.21■□□□□ 0.67
TGFBR1-201ENST00000374990 ATP4BP51164 291 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 TAS2R41P59536 307 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 SLC38A4Q969I6 547 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 CLEC4MQ9H2X3 399 aaPredicted RBP19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.2■□□□□ 0.664e-7■■■□□ 15.2
TGFBR1-201ENST00000374990 CICQ96RK0 1608 aaPredicted RBP19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 OLIG2Q13516 323 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 SF1Q15637 639 aaKnown RBP19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 ATP13A5Q4VNC0 1218 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 DCST1Q5T197 706 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 CYP2U1Q7Z449 544 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 PLD6Q8N2A8 252 aaKnown RBP19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 WFIKKN2Q8TEU8 576 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 PTBP2Q9UKA9 531 aaKnown RBP19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 OAZ3Q9UMX2 235 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 CLDN25C9JDP6 229 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 ARVCFO00192 962 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 ANXA8P13928 327 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 CARD16Q5EG05 197 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 FCGR1BQ92637 280 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 HIST1H2ABP04908 130 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 GALK1P51570 392 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 CCNHP51946 323 aaPredicted RBP19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 ZNF252P-AS1Q0IIN9 211 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 IRF5Q13568 498 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 C11orf88Q6PI97 169 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 AHSA2Q719I0 299 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 HIST3H2AQ7L7L0 130 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 HDDC2Q7Z4H3 204 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 HIST1H2ACQ93077 130 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 ZNF347Q96SE7 839 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 INHAP05111 366 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 NUP98P52948 1817 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 LYSMD3Q7Z3D4 306 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 TIAM2Q8IVF5 1701 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 HTATIP2Q9BUP3 242 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 TTLL2Q9BWV7 592 aa19.2■□□□□ 0.66
TGFBR1-201ENST00000374990 TOP3BO95985 862 aaKnown RBP19.19■□□□□ 0.66
TGFBR1-201ENST00000374990 UGT1A6P19224 532 aa19.19■□□□□ 0.66
TGFBR1-201ENST00000374990 UGT1A1P22309 533 aa19.19■□□□□ 0.66
TGFBR1-201ENST00000374990 UGT1A4P22310 534 aa19.19■□□□□ 0.66
TGFBR1-201ENST00000374990 UGT1A3P35503 534 aa19.19■□□□□ 0.66
TGFBR1-201ENST00000374990 UGT1A5P35504 534 aa19.19■□□□□ 0.66
TGFBR1-201ENST00000374990 KCTD8Q6ZWB6 473 aa19.19■□□□□ 0.66
TGFBR1-201ENST00000374990 LRRC70Q7Z2Q7 622 aa19.19■□□□□ 0.66
TGFBR1-201ENST00000374990 ABCB8Q9NUT2 735 aa19.19■□□□□ 0.66
TGFBR1-201ENST00000374990 FAM86C2PA6NEL3 165 aa19.19■□□□□ 0.66
TGFBR1-201ENST00000374990 HAS3O00219 553 aa19.19■□□□□ 0.66
TGFBR1-201ENST00000374990 CCL16O15467 120 aa19.19■□□□□ 0.66
TGFBR1-201ENST00000374990 IFNA16P05015 189 aa19.19■□□□□ 0.66
TGFBR1-201ENST00000374990 CBSLP0DN79 551 aa19.19■□□□□ 0.66
TGFBR1-201ENST00000374990 CBSP35520 551 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms