RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 NDUFS1P28331 727 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 PLTPP55058 493 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 GABREP78334 506 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 MPP1Q00013 466 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 C3orf38Q5JPI3 329 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 ZDHHC24Q6UX98 284 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CTAGE6Q86UF2 777 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 VRK3Q8IV63 474 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CTAGE4Q8IX94 777 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 NOA1Q8NC60 698 aaKnown RBP20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 FBXO36Q8NEA4 188 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 ASZ1Q8WWH4 475 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 RSC1A1Q92681 617 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CCDC74BQ96LY2 380 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 ZMYND15Q9H091 742 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CCDC86Q9H6F5 360 aaKnown RBP20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 KIR3DX1Q9H7L2 352 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 MVB12BQ9H7P6 319 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 NBEAQ8NFP9 2946 aa20.46■□□□□ 0.87
MAP1LC3A-202ENST00000374837 TMEM8BA6NDV4 472 aa20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 H3BMM5 538 aa20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 AGRPO00253 132 aa20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 NIPSNAP2O75323 286 aa20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 HAUS5O94927 633 aa20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 APOA4P06727 396 aa20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 THRAP10827 490 aa20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 CARSP49589 748 aaKnown RBP20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 CAV1Q03135 178 aa20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 TRA2AQ13595 282 aaKnown RBP eCLIP20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 C16orf72Q14CZ0 275 aa20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 PLCL1Q15111 1095 aa20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 SNAP47Q5SQN1 464 aa20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 TRMT10BQ6PF06 316 aaKnown RBP20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 RAB11FIP2Q7L804 512 aa20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 ZBED8Q8IZ13 594 aa20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 SLC22A15Q8IZD6 547 aa20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 FBXO39Q8N4B4 442 aa20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 C2CD4AQ8NCU7 369 aaPredicted RBP20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 RCBTB1Q8NDN9 531 aa20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 CERS2Q96G23 380 aa20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 PRR11Q96HE9 360 aaPredicted RBP20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 GALPQ9UBC7 116 aa20.45■□□□□ 0.86
MAP1LC3A-202ENST00000374837 ESYT3A0FGR9 886 aa20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 KPNA5O15131 536 aa20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 EIF3HO15372 352 aaKnown RBP eCLIP20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 SLCO2B1O94956 709 aa20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 CHRM3P20309 590 aa20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 GFERP55789 205 aa20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 EIF3IQ13347 325 aaKnown RBP20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 TMED2Q15363 201 aa20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 ZNF549Q6P9A3 640 aa20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 FOXR1Q6PIV2 292 aa20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 CNSTQ6PJW8 725 aa20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 OTOAQ7RTW8 1153 aa20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 PLXDC1Q8IUK5 500 aa20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 CNTN4Q8IWV2 1026 aa20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 FBXO25Q8TCJ0 367 aa20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 SAYSD1Q9NPB0 183 aa20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 DKK4Q9UBT3 224 aa20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 ASF1AQ9Y294 204 aa20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 LOXL2Q9Y4K0 774 aa20.44■□□□□ 0.86
MAP1LC3A-202ENST00000374837 PKD1L2Q7Z442 2459 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 A8MU76 341 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 PLD2O14939 933 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 BRINP1O60477 761 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 C9P02748 559 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 HGFP14210 728 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 GABRB3P28472 473 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 CAPZBP47756 277 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 LEPRP48357 1165 aaKnown RBP20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 GUCY2DQ02846 1103 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 ABRQ12979 859 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 PRKG2Q13237 762 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 FRG1Q14331 258 aaKnown RBP20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 PLEKHS1Q5SXH7 462 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 TEDDM1Q5T9Z0 273 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 ARHGAP22Q7Z5H3 698 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 ACVR1CQ8NER5 493 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 OR5AR1Q8NGP9 310 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 GABPB2Q8TAK5 448 aaPredicted RBP20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 SEC14L1Q92503 715 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 FAM136AQ96C01 138 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 CMKLR1Q99788 373 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 PPANQ9NQ55 473 aaKnown RBP20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 LATS2Q9NRM7 1088 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 EPHA6Q9UF33 1036 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 KLHL3Q9UH77 587 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 PCDHGA8Q9Y5G5 932 aa20.43■□□□□ 0.86
MAP1LC3A-202ENST00000374837 HGSO14964 777 aaPredicted RBP20.42■□□□□ 0.86
MAP1LC3A-202ENST00000374837 CAPN5O15484 640 aaPredicted RBP20.42■□□□□ 0.86
MAP1LC3A-202ENST00000374837 KLHL35Q6PF15 583 aa20.42■□□□□ 0.86
MAP1LC3A-202ENST00000374837 TBC1D21Q8IYX1 336 aa20.42■□□□□ 0.86
MAP1LC3A-202ENST00000374837 LSMEM2Q8N112 164 aa20.42■□□□□ 0.86
MAP1LC3A-202ENST00000374837 CEP112Q8N8E3 955 aa20.42■□□□□ 0.86
MAP1LC3A-202ENST00000374837 OR4E2Q8NGC2 313 aa20.42■□□□□ 0.86
MAP1LC3A-202ENST00000374837 OR52E1Q8NGJ3 308 aa20.42■□□□□ 0.86
MAP1LC3A-202ENST00000374837 GSDMBQ8TAX9 411 aa20.42■□□□□ 0.86
MAP1LC3A-202ENST00000374837 PYROXD1Q8WU10 500 aa20.42■□□□□ 0.86
MAP1LC3A-202ENST00000374837 ZCCHC14Q8WYQ9 949 aaKnown RBP20.42■□□□□ 0.86
MAP1LC3A-202ENST00000374837 SLC46A1Q96NT5 459 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms