RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 C15orf38-AP3S2A0A0A6YYH1 394 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 MAGEA13PA6NCF6 341 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 TRIM38O00635 465 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 NME4O00746 187 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 NOBOXO60393 691 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 KERAO60938 352 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 PCDH8O95206 1070 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 CYP4B1P13584 511 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 NAE1Q13564 534 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 CNKSR3Q6P9H4 555 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 CRTC1Q6UUV9 634 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 ZNF621Q6ZSS3 439 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 ARPINQ7Z6K5 226 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 HMGN2P46Q86SG4 172 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 STK32CQ86UX6 486 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 TEX26Q8N6G2 289 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 CEP295NLQ96MC4 621 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 ANKRD27Q96NW4 1050 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 DPY30Q9C005 99 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 SUV39H2Q9H5I1 410 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 ZNF225Q9UK10 706 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 SEC16AO15027 2179 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 NINQ8N4C6 2090 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 PIKFYVEQ9Y2I7 2098 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 CACNG3O60359 315 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 FGBP02675 491 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 C1QCP02747 245 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 F11P03951 625 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 GNAO1P09471 354 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 SRCP12931 536 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 MAP4P27816 1152 aaKnown RBP10.61□□□□□ -0.71
CXCL12-203ENST00000374429 POLR2JP52435 117 aaKnown RBP10.61□□□□□ -0.71
CXCL12-203ENST00000374429 SEC13P55735 322 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 CACNG1Q06432 222 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 GRM2Q14416 872 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 CCSMST1Q4G0I0 132 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 FNDC3BQ53EP0 1204 aaKnown RBP10.61□□□□□ -0.71
CXCL12-203ENST00000374429 PIGGQ5H8A4 983 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 SPANXN4Q5MJ08 99 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 IRGCQ6NXR0 463 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 SETD3Q86TU7 594 aaPredicted RBP10.61□□□□□ -0.71
CXCL12-203ENST00000374429 FAM20CQ8IXL6 584 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 LIX1Q8N485 282 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 FAM47BQ8NA70 645 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 ITFG1Q8TB96 612 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 TDP1Q9NUW8 608 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 SPTBP11277 2137 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 CACNA1IQ9P0X4 2223 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 GNG14A0A1W2PPG7 69 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 HTR3EA5X5Y0 456 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 MAGEB3O15480 346 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 FKBP9O95302 570 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 ZBTB11O95625 1053 aaPredicted RBP10.61□□□□□ -0.71
CXCL12-203ENST00000374429 TMED10P49755 219 aaKnown RBP10.61□□□□□ -0.71
CXCL12-203ENST00000374429 ST8SIA6P61647 398 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 MSLNQ13421 630 aaPredicted RBP10.61□□□□□ -0.71
CXCL12-203ENST00000374429 SELPLGQ14242 412 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 MAPRE2Q15555 327 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 SETMARQ53H47 684 aaPredicted RBP10.61□□□□□ -0.71
CXCL12-203ENST00000374429 TMEM31Q5JXX7 168 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 C6orf136Q5SQH8 315 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 CYHR1Q6ZMK1 362 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 FKBP9P1Q75LS8 142 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 PEX5LQ8IYB4 626 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 CFAP206Q8IYR0 622 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 ZBTB2Q8N680 514 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 SNX19Q92543 992 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 PPP1R14BQ96C90 147 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 MPP4Q96JB8 637 aa10.61□□□□□ -0.71
CXCL12-203ENST00000374429 CDK5RAP1Q96SZ6 601 aaKnown RBP10.61□□□□□ -0.71
CXCL12-203ENST00000374429 CELSR3Q9NYQ7 3312 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 DFNA5O60443 496 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 EPB42P16452 691 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 MSH3P20585 1137 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 IL10P22301 178 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 LHCGRP22888 699 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 LBX1P52954 281 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 ZNF33AQ06730 810 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 PTCHD3Q3KNS1 767 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 AARS2Q5JTZ9 985 aaKnown RBP10.6□□□□□ -0.71
CXCL12-203ENST00000374429 ANKRD34AQ69YU3 496 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 USP45Q70EL2 814 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 MMAAQ8IVH4 418 aaKnown RBP10.6□□□□□ -0.71
CXCL12-203ENST00000374429 RBFAQ8N0V3 343 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 PPP2R3CQ969Q6 453 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 LRRC58Q96CX6 371 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 TRIB3Q96RU7 358 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 EFHD1Q9BUP0 239 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 ELAC1Q9H777 363 aaKnown RBP10.6□□□□□ -0.71
CXCL12-203ENST00000374429 OAZ3Q9UMX2 235 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 WASH4PA8MWX3 477 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 PTGES3LE9PB15 166 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 GRM6O15303 877 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 IGLV3-27P01718 113 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 TRBC1P01850 177 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 LAG3P18627 525 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 BDKRB1P46663 353 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 SH3BGRP55822 239 aaPredicted RBP10.6□□□□□ -0.71
CXCL12-203ENST00000374429 MYLK3Q32MK0 819 aa10.6□□□□□ -0.71
CXCL12-203ENST00000374429 LARP4Q71RC2 724 aaKnown RBP eCLIP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms