RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 BTN3A3O00478 584 aa18.42■□□□□ 0.54
CKS1B-203ENST00000368439 STK17BO94768 372 aa18.42■□□□□ 0.54
CKS1B-203ENST00000368439 TPBGLP0DKB5 382 aa18.42■□□□□ 0.54
CKS1B-203ENST00000368439 FGF5P12034 268 aa18.42■□□□□ 0.54
CKS1B-203ENST00000368439 ARCN1P48444 511 aaKnown RBP18.42■□□□□ 0.54
CKS1B-203ENST00000368439 RHDQ02161 417 aa18.42■□□□□ 0.54
CKS1B-203ENST00000368439 FOXM1Q08050 763 aa18.42■□□□□ 0.54
CKS1B-203ENST00000368439 KRT33BQ14525 404 aa18.42■□□□□ 0.54
CKS1B-203ENST00000368439 IL11RAQ14626 422 aa18.42■□□□□ 0.54
CKS1B-203ENST00000368439 BRD3Q15059 726 aa18.42■□□□□ 0.54
CKS1B-203ENST00000368439 AARS2Q5JTZ9 985 aaKnown RBP18.42■□□□□ 0.54
CKS1B-203ENST00000368439 DNTTIP2Q5QJE6 756 aaKnown RBP18.42■□□□□ 0.54
CKS1B-203ENST00000368439 KIAA1614Q5VZ46 1190 aa18.42■□□□□ 0.54
CKS1B-203ENST00000368439 ARMC3Q5W041 872 aa18.42■□□□□ 0.54
CKS1B-203ENST00000368439 CACNA2D3Q8IZS8 1091 aa18.42■□□□□ 0.54
CKS1B-203ENST00000368439 MCUQ8NE86 351 aa18.42■□□□□ 0.54
CKS1B-203ENST00000368439 PPM1MQ96MI6 270 aa18.42■□□□□ 0.54
CKS1B-203ENST00000368439 TRIM56Q9BRZ2 755 aaKnown RBP18.42■□□□□ 0.54
CKS1B-203ENST00000368439 CARD6Q9BX69 1037 aa18.42■□□□□ 0.54
CKS1B-203ENST00000368439 TWSG1Q9GZX9 223 aa18.42■□□□□ 0.54
CKS1B-203ENST00000368439 WDR70Q9NW82 654 aa18.42■□□□□ 0.54
CKS1B-203ENST00000368439 PCDHGA4Q9Y5G9 962 aa18.42■□□□□ 0.54
CKS1B-203ENST00000368439 IQCF5A8MTL0 148 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 ERVH48-1M5A8F1 160 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 PRMT5O14744 637 aaPredicted RBP18.41■□□□□ 0.54
CKS1B-203ENST00000368439 GPC4O75487 556 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 MLNP12872 115 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 FOLR1P15328 257 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 ZNF28P17035 718 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 POLR2CP19387 275 aaPredicted RBP18.41■□□□□ 0.54
CKS1B-203ENST00000368439 PPARGP37231 505 aaPredicted RBP18.41■□□□□ 0.54
CKS1B-203ENST00000368439 MAGEA3P43357 314 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 TTPAP49638 278 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 ATP1A2P50993 1020 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 SARNPP82979 210 aaKnown RBP18.41■□□□□ 0.54
CKS1B-203ENST00000368439 PAPD7Q5XG87 772 aaKnown RBP18.41■□□□□ 0.54
CKS1B-203ENST00000368439 ZNF449Q6P9G9 518 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 KMT5CQ86Y97 462 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 VRK3Q8IV63 474 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 NLGN4XQ8N0W4 816 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 AGGF1Q8N302 714 aaeCLIP18.41■□□□□ 0.54
CKS1B-203ENST00000368439 D2HGDHQ8N465 521 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 NAT8LQ8N9F0 302 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 LSM14AQ8ND56 463 aaKnown RBP18.41■□□□□ 0.54
CKS1B-203ENST00000368439 NLGN4YQ8NFZ3 816 aaPredicted RBP18.41■□□□□ 0.54
CKS1B-203ENST00000368439 OR5AR1Q8NGP9 310 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 LCN9Q8WX39 176 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 ANP32BQ92688 251 aaKnown RBP18.41■□□□□ 0.54
CKS1B-203ENST00000368439 SRMSQ9H3Y6 488 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 ANAPC5Q9UJX4 755 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 POMT2Q9UKY4 750 aa18.41■□□□□ 0.54
CKS1B-203ENST00000368439 ATRXP46100 2492 aa18.4■□□□□ 0.54
CKS1B-203ENST00000368439 BTN3A1O00481 513 aa18.4■□□□□ 0.54
CKS1B-203ENST00000368439 VAPBO95292 243 aa18.4■□□□□ 0.54
CKS1B-203ENST00000368439 LIFP15018 202 aa18.4■□□□□ 0.54
CKS1B-203ENST00000368439 TCP1P17987 556 aaKnown RBP18.4■□□□□ 0.54
CKS1B-203ENST00000368439 ITGB6P18564 788 aa18.4■□□□□ 0.54
CKS1B-203ENST00000368439 RPS3P23396 243 aaKnown RBP eCLIP18.4■□□□□ 0.541e-8■■■■■ 29.3
CKS1B-203ENST00000368439 PLOD1Q02809 727 aaPredicted RBP18.4■□□□□ 0.54
CKS1B-203ENST00000368439 PRKG2Q13237 762 aa18.4■□□□□ 0.54
CKS1B-203ENST00000368439 KCNAB1Q14722 419 aa18.4■□□□□ 0.54
CKS1B-203ENST00000368439 TYSND1Q2T9J0 566 aa18.4■□□□□ 0.54
CKS1B-203ENST00000368439 KIAA0930Q6ICG6 404 aaPredicted RBP18.4■□□□□ 0.54
CKS1B-203ENST00000368439 FBXO38Q6PIJ6 1188 aa18.4■□□□□ 0.54
CKS1B-203ENST00000368439 SLC22A15Q8IZD6 547 aa18.4■□□□□ 0.54
CKS1B-203ENST00000368439 ADGRF3Q8IZF5 1079 aa18.4■□□□□ 0.54
CKS1B-203ENST00000368439 CARFQ8N187 725 aa18.4■□□□□ 0.54
CKS1B-203ENST00000368439 KRT222Q8N1A0 295 aa18.4■□□□□ 0.54
CKS1B-203ENST00000368439 SERPINB12Q96P63 405 aa18.4■□□□□ 0.54
CKS1B-203ENST00000368439 HGH1Q9BTY7 390 aa18.4■□□□□ 0.54
CKS1B-203ENST00000368439 XKR8Q9H6D3 395 aa18.4■□□□□ 0.54
CKS1B-203ENST00000368439 ICKQ9UPZ9 632 aa18.4■□□□□ 0.54
CKS1B-203ENST00000368439 SNRNP200O75643 2136 aaKnown RBP18.4■□□□□ 0.54
CKS1B-203ENST00000368439 GOLGA6L10A0A0M3HER8 536 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 LOC101059948A0A1B0GTJ6 334 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 UBA6A0AVT1 1052 aaPredicted RBP18.39■□□□□ 0.53
CKS1B-203ENST00000368439 FANCGO15287 622 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 KALRNO60229 2985 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 TIAF1O95411 115 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 EBLN1P0CF75 366 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 MAP4P27816 1152 aaKnown RBP18.39■□□□□ 0.53
CKS1B-203ENST00000368439 AOAHP28039 575 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 HSD11B2P80365 405 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 MAP7Q14244 749 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.39■□□□□ 0.53
CKS1B-203ENST00000368439 SYTL3Q4VX76 610 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 AMIGO1Q86WK6 493 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 CREG2Q8IUH2 290 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 TBC1D21Q8IYX1 336 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 IL22RA1Q8N6P7 574 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 SIDT2Q8NBJ9 832 aaKnown RBP18.39■□□□□ 0.53
CKS1B-203ENST00000368439 OR5K2Q8NHB8 316 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 GRK7Q8WTQ7 553 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 SLCO2A1Q92959 643 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 RNF31Q96EP0 1072 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 WBP1Q96G27 269 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 BIRC8Q96P09 236 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 SLC12A9Q9BXP2 914 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 PITPNM3Q9BZ71 974 aa18.39■□□□□ 0.53
CKS1B-203ENST00000368439 DDX47Q9H0S4 455 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms