RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 PSD4Q8NDX1 1056 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 PROKR1Q8TCW9 393 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 KCNE4Q8WWG9 221 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 NEU4Q8WWR8 484 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 RFKQ969G6 155 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 SLC22A18Q96BI1 424 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 PHF21BQ96EK2 531 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 ALG14Q96F25 216 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 SNF8Q96H20 258 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 SORCS2Q96PQ0 1159 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 USP28Q96RU2 1077 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 KCNK16Q96T55 309 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 SMOQ99835 787 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 RTKNQ9BST9 563 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 HAUS8Q9BT25 410 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 STRA6Q9BX79 667 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 FAM129AQ9BZQ8 928 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 SLC5A7Q9GZV3 580 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 UPF3AQ9H1J1 476 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 MVB12BQ9H7P6 319 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 TMEM206Q9H813 350 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 COQ10BQ9H8M1 238 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 MLXIPQ9HAP2 919 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 SCPEP1Q9HB40 452 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 TMEM8AQ9HCN3 771 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 AGPAT5Q9NUQ2 364 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 ABCB8Q9NUT2 735 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 WWOXQ9NZC7 414 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 NDUFAF4Q9P032 175 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 KLHL9Q9P2J3 617 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 DNMT3BQ9UBC3 853 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 CD207Q9UJ71 328 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 NUDCQ9Y266 331 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 EXOC6BQ9Y2D4 811 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 R3HDM2Q9Y2K5 976 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 ITPR1Q14643 2758 aa5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 TRIP12Q14669 1992 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-204ENST00000368292 ASTN1O14525 1302 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 TENM4Q6N022 2769 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 MICAL3Q7RTP6 2002 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 CNOT1A5YKK6 2376 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 CYP3A7-CYP3A51PA0A087WV96 503 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 A0A1B0GWJ7 208 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 TTC26A0AVF1 554 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 ARHGEF37A1IGU5 675 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 ERICH2A1L162 156 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 TARSL2A2RTX5 802 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 URADA6NGE7 173 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 F8W810 466 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 PDLIM1O00151 329 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 PIP5K1BO14986 540 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 LSM1O15116 133 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 MTX2O75431 263 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 CLN5O75503 358 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 GJB5O95377 273 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 GNA14O95837 355 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 OPN1LWP04000 364 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 URODP06132 367 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 GLAP06280 429 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 ADH4P08319 380 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 ITGA5P08648 1049 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 SUPT20HL2P0C7V6 817 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 UBL4AP11441 157 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 FDPSP14324 419 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 ANPEPP15144 967 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 CYP3A7P24462 503 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 MDH1P40925 334 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 PCP4P48539 62 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 PTDSS1P48651 473 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 LMAN1P49257 510 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 AARSP49588 968 aaKnown RBP eCLIP5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 CLCNKAP51800 687 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 PRKAA2P54646 552 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 LILRA4P59901 499 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 RPS3AP61247 264 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 PIGFQ07326 219 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 ZNF844Q08AG5 666 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 FHL2Q14192 279 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 GPR68Q15743 365 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 TBCCQ15814 346 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 MEP1BQ16820 701 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 ZNF628Q5EBL2 1059 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 PLEKHS1Q5SXH7 462 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 TMTC4Q5T4D3 741 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 GRTP1Q5TC63 336 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 ATG16L1Q676U5 607 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 TMEM53Q6P2H8 277 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 KLHL17Q6TDP4 642 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 SUSD1Q6UWL2 747 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 H1FNTQ75WM6 255 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 RRAGAQ7L523 313 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 PLPPR4Q7Z2D5 763 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 TMPRSS9Q7Z410 1059 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 STX12Q86Y82 276 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 VRK3Q8IV63 474 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 SIX6OS1Q8N1H7 587 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 FAM81AQ8TBF8 368 aa5.03□□□□□ -1.6
ECHDC1-204ENST00000368292 MAIP1Q8WWC4 291 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms