RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 MAP3K7CLP57077 242 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 PRAMEP78395 509 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 RELAQ04206 551 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 NFATC3Q12968 1075 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 PMS2P3Q13401 168 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 RCAN2Q14206 197 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 KIF19Q2TAC6 998 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 TMEM196Q5HYL7 178 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 ISLR2Q6UXK2 745 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 FRA10AC1Q70Z53 315 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 METTL23Q86XA0 190 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 CILP2Q8IUL8 1156 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 DDIASQ8IXT1 998 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 THEM5Q8N1Q8 247 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 DPP10Q8N608 796 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 FAM160A2Q8N612 972 aaPredicted RBP11.35□□□□□ -0.59
USF1-201ENST00000368019 ZNF513Q8N8E2 541 aaPredicted RBP11.35□□□□□ -0.59
USF1-201ENST00000368019 SNX31Q8N9S9 440 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 SPATA22Q8NHS9 363 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 GRIN3AQ8TCU5 1115 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 DQX1Q8TE96 717 aaKnown RBP11.35□□□□□ -0.59
USF1-201ENST00000368019 USP33Q8TEY7 942 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 TWIST2Q8WVJ9 160 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 HDAC2Q92769 488 aaKnown RBP11.35□□□□□ -0.59
USF1-201ENST00000368019 TADA1Q96BN2 335 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 UNKQ9C0B0 810 aaKnown RBP11.35□□□□□ -0.59
USF1-201ENST00000368019 BRINP2Q9C0B6 783 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 PAIP1Q9H074 479 aaKnown RBP11.35□□□□□ -0.59
USF1-201ENST00000368019 LIN28AQ9H9Z2 209 aaKnown RBP11.35□□□□□ -0.59
USF1-201ENST00000368019 TNFRSF12AQ9NP84 129 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 RIC8BQ9NVN3 520 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 AIG1Q9NVV5 245 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 THG1LQ9NWX6 298 aaKnown RBP11.35□□□□□ -0.59
USF1-201ENST00000368019 UBP1Q9NZI7 540 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 AURKCQ9UQB9 309 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 CCL26Q9Y258 94 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 AP3M1Q9Y2T2 418 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 COQ6Q9Y2Z9 468 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 GPR45Q9Y5Y3 372 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 NUP205Q92621 2012 aa11.35□□□□□ -0.59
USF1-201ENST00000368019 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.34□□□□□ -0.59
USF1-201ENST00000368019 MROH6A6NGR9 719 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 CLDN5O00501 218 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 EI24O14681 340 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 GDF9O60383 454 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 DEAF1O75398 565 aaPredicted RBP11.34□□□□□ -0.59
USF1-201ENST00000368019 SERPINB7O75635 380 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 SULT1C4O75897 302 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 CDK14O94921 469 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 S1PR4O95977 384 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 MT-CYBP00156 380 aaPredicted RBP11.34□□□□□ -0.59
USF1-201ENST00000368019 ALBP02768 609 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 EIF2S1P05198 315 aaKnown RBP11.34□□□□□ -0.59
USF1-201ENST00000368019 F7P08709 466 aaPredicted RBP11.34□□□□□ -0.59
USF1-201ENST00000368019 OCM2P0CE71 109 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 OCMP0CE72 109 aaPredicted RBP11.34□□□□□ -0.59
USF1-201ENST00000368019 CD1DP15813 335 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 HDCP19113 662 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 CD9P21926 228 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 SLC5A3P53794 718 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 WNT3AP56704 352 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 KCNK10P57789 538 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 GSTM4Q03013 218 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 RUNX3Q13761 415 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 TGFBIQ15582 683 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 KCTD8Q6ZWB6 473 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 PTAR1Q7Z6K3 402 aaPredicted RBP11.34□□□□□ -0.59
USF1-201ENST00000368019 TFAP2DQ7Z6R9 452 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 TAC4Q86UU9 113 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 ABCA7Q8IZY2 2146 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 RTL3Q8N8U3 475 aaKnown RBP11.34□□□□□ -0.59
USF1-201ENST00000368019 OR52E4Q8NGH9 312 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 OR9I1Q8NGQ6 314 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 ACDQ96AP0 544 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 IMP4Q96G21 291 aaKnown RBP11.34□□□□□ -0.59
USF1-201ENST00000368019 AURKBQ96GD4 344 aaPredicted RBP11.34□□□□□ -0.59
USF1-201ENST00000368019 PKMYT1Q99640 499 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 SLC39A8Q9C0K1 460 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 ALG2Q9H553 416 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 SYTL2Q9HCH5 934 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 CYP4F12Q9HCS2 524 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 ACSS2Q9NR19 701 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 RBM22Q9NW64 420 aaKnown RBP eCLIP11.34□□□□□ -0.59
USF1-201ENST00000368019 ABI2Q9NYB9 513 aaPredicted RBP11.34□□□□□ -0.59
USF1-201ENST00000368019 USE1Q9NZ43 259 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 IFT80Q9P2H3 777 aaPredicted RBP11.34□□□□□ -0.59
USF1-201ENST00000368019 SLC2A6Q9UGQ3 507 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 PSME2Q9UL46 239 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 OAZ3Q9UMX2 235 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 ERGIC3Q9Y282 383 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 PCDHB5Q9Y5E4 795 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 PCDHB3Q9Y5E6 796 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 DNAJC15Q9Y5T4 150 aa11.34□□□□□ -0.59
USF1-201ENST00000368019 OAS3Q9Y6K5 1087 aaKnown RBP11.34□□□□□ -0.59
USF1-201ENST00000368019 DFFAO00273 331 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 KPNA4O00629 521 aaPredicted RBP11.33□□□□□ -0.6
USF1-201ENST00000368019 TM4SF5O14894 197 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 MAGEB3O15480 346 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 KLK8O60259 260 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 FOXD2O60548 495 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms