RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 KDM4BO94953 1096 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 FGF4P08620 206 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 GSTM1P09488 218 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 CBSLP0DN79 551 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 RAP2AP10114 183 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 CDH1P12830 882 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 CBSP35520 551 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 IL18Q14116 193 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 PLA2G4EQ3MJ16 856 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 UBXN11Q5T124 520 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 CHST9Q7L1S5 443 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 CHMP1BQ7LBR1 199 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 RASAL3Q86YV0 1011 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 SYT12Q8IV01 421 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 SPAG16Q8N0X2 631 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 TRPV3Q8NET8 790 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 OR2T12Q8NG77 320 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 UBE2E3Q969T4 207 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 ZNF717Q9BY31 904 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 RNF39Q9H2S5 420 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 AKTIPQ9H8T0 292 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 ARNT2Q9HBZ2 717 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 NLE1Q9NVX2 485 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 ARL15Q9NXU5 204 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 SNX10Q9Y5X0 201 aa5.29□□□□□ -1.56
CDC42BPA-204ENST00000366767 PRAMEF33A0A0G2JMD5 474 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 MSI1O43347 362 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 PRAMEF10O60809 474 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 TBL1XO60907 577 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 PSIP1O75475 530 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 MZF1P28698 734 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 HPCAL1P37235 193 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 CAPZA2P47755 286 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 UPP1Q16831 310 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 GALNT12Q8IXK2 581 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 MINDY1Q8N5J2 469 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 S100PBPQ96BU1 408 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 GPR21Q99679 349 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 TTPALQ9BTX7 342 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 REEP1Q9H902 201 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 CXorf21Q9HAI6 301 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 RRAGCQ9HB90 399 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 EIF3KQ9UBQ5 218 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 A0A1W2PP18 115 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 ILVBLA1L0T0 632 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 OR6C70A6NIJ9 312 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 C9P02748 559 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 SCN1BQ07699 218 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 SWI5Q1ZZU3 235 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 AP5B1Q2VPB7 878 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 GPR33Q49SQ1 333 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 PAOXQ6QHF9 649 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 KCTD8Q6ZWB6 473 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 ERMP1Q7Z2K6 904 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 THAP5Q7Z6K1 395 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 HID1Q8IV36 788 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 DENND1CQ8IV53 801 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 PHTF2Q8N3S3 785 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 SPPL2AQ8TCT8 520 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 NELL1Q92832 810 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 TMEM159Q96B96 161 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 TMCO6Q96DC7 493 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 MYO19Q96H55 970 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 SLC17A6Q9P2U8 582 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 DNAJB9Q9UBS3 223 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 ZFP37Q9Y6Q3 630 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 TP73O15350 636 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 CKMP06732 381 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 XRCC1P18887 633 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 PRMT2P55345 433 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 RAB2AP61019 212 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 MYBPC3Q14896 1274 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 RAB41Q5JT25 222 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 ANKRD26P1Q6NSI1 321 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 ZNF534Q76KX8 674 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 HS6ST3Q8IZP7 471 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 KRT78Q8N1N4 520 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 NT5C3BQ969T7 300 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 QRFPRQ96P65 431 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 COPS8Q99627 209 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 PKP2Q99959 881 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 XKR8Q9H6D3 395 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 LRTM1Q9HBL6 345 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 WDR6Q9NNW5 1121 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 TMEM9Q9P0T7 183 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 TBC1D14Q9P2M4 693 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 EGFL7Q9UHF1 273 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 SLC38A8A6NNN8 435 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 DNAJB5O75953 348 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 TSPAN8P19075 237 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 CDK9P50750 372 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 ZNF423Q2M1K9 1284 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 MPPE1Q53F39 396 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 PGM2L1Q6PCE3 622 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 COLGALT2Q8IYK4 626 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 DEPDC4Q8N2C3 294 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 CENPSQ8N2Z9 138 aa5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 TTC29Q8NA56 475 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-204ENST00000366767 GPR150Q8NGU9 434 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms