RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 TMEM181Q9P2C4 612 aa18.29■□□□□ 0.52
SNX11-201ENST00000359238 DNAH14Q0VDD8 3507 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 UBA6A0AVT1 1052 aaPredicted RBP18.28■□□□□ 0.52
SNX11-201ENST00000359238 ANTXRLA6NF34 631 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 TRPC5OSA6NMA1 111 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 H3BMM5 538 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 CLOCKO15516 846 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 POU2F2P09086 479 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 LPOP22079 712 aaPredicted RBP18.28■□□□□ 0.52
SNX11-201ENST00000359238 FMO4P31512 558 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 TYSND1Q2T9J0 566 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 NPAS3Q8IXF0 933 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 RYBPQ8N488 228 aaPredicted RBP18.28■□□□□ 0.52
SNX11-201ENST00000359238 GPR150Q8NGU9 434 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 MYO19Q96H55 970 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 ZFYVE19Q96K21 471 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 ZNF347Q96SE7 839 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 C9orf16Q9BUW7 83 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 GPN2Q9H9Y4 310 aaPredicted RBP18.28■□□□□ 0.52
SNX11-201ENST00000359238 FAM50BQ9Y247 325 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 GAPDHSO14556 408 aaPredicted RBP18.28■□□□□ 0.52
SNX11-201ENST00000359238 JUNBP17275 347 aaPredicted RBP18.28■□□□□ 0.52
SNX11-201ENST00000359238 MATN1P21941 496 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 SLC12A2P55011 1212 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 TECRLQ5HYJ1 363 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 DNAJC14Q6Y2X3 702 aaPredicted RBP18.28■□□□□ 0.52
SNX11-201ENST00000359238 ADIPOR2Q86V24 386 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 CHST14Q8NCH0 376 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 ADGRE3Q9BY15 652 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 TPK1Q9H3S4 243 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 TNFRSF12AQ9NP84 129 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 TBC1D14Q9P2M4 693 aa18.28■□□□□ 0.52
SNX11-201ENST00000359238 TRIOO75962 3097 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 SDHDO14521 159 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 CLDN7O95471 211 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 ARSAP15289 507 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 FDXRP22570 491 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 GSSP48637 474 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 HLCSP50747 726 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 KCNJ8Q15842 424 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 NEDD8Q15843 81 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 ATP6AP1Q15904 470 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 GEN1Q17RS7 908 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 FAM78AQ5JUQ0 283 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 FAM45BPQ6NSW5 357 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 RFLNAQ6ZTI6 216 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 C12orf40Q86WS4 652 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 KDM1BQ8NB78 822 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 FAM45AQ8TCE6 357 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 CYB5D2Q8WUJ1 264 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 FGF13Q92913 245 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 ZUFSPQ96AP4 578 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 ALG9Q9H6U8 611 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 IL17CQ9P0M4 197 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.27■□□□□ 0.52
SNX11-201ENST00000359238 PSME2Q9UL46 239 aa18.27■□□□□ 0.52
SNX11-201ENST00000359238 OTOL1A6NHN0 477 aaPredicted RBP18.27■□□□□ 0.51
SNX11-201ENST00000359238 C2orf81A6NN90 581 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 IQCF5A8MTL0 148 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 TMEM233B4DJY2 109 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 ALOX5P09917 674 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 HNF1BP35680 557 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 GRIA3P42263 894 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 TUBA3CQ13748 450 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 ZNF846Q147U1 533 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 CDKN3Q16667 212 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 ARMC12Q5T9G4 340 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 C8orf82Q6P1X6 216 aaPredicted RBP18.27■□□□□ 0.51
SNX11-201ENST00000359238 HACD2Q6Y1H2 254 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 Q6ZVU0 165 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 GALNT7Q86SF2 657 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 SLC7A5P1Q8MH63 180 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 CADM3Q8N126 398 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 CELF5Q8N6W0 485 aaKnown RBP18.27■□□□□ 0.51
SNX11-201ENST00000359238 RAB2BQ8WUD1 216 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 CYGBQ8WWM9 190 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 PEX13Q92968 403 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 TIFAQ96CG3 184 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 MRPL38Q96DV4 380 aaKnown RBP18.27■□□□□ 0.51
SNX11-201ENST00000359238 AGPAT4Q9NRZ5 378 aa18.27■□□□□ 0.51
SNX11-201ENST00000359238 SEC14L2O76054 403 aa18.26■□□□□ 0.51
SNX11-201ENST00000359238 FSHRP23945 695 aa18.26■□□□□ 0.51
SNX11-201ENST00000359238 SQLEQ14534 574 aa18.26■□□□□ 0.51
SNX11-201ENST00000359238 NDUFA5Q16718 116 aa18.26■□□□□ 0.51
SNX11-201ENST00000359238 FBXO48Q5FWF7 155 aa18.26■□□□□ 0.51
SNX11-201ENST00000359238 MRNIPQ6NTE8 343 aa18.26■□□□□ 0.51
SNX11-201ENST00000359238 TMEM214Q6NUQ4 689 aaKnown RBP18.26■□□□□ 0.51
SNX11-201ENST00000359238 SPRED1Q7Z699 444 aa18.26■□□□□ 0.51
SNX11-201ENST00000359238 TMCO5AQ8N6Q1 288 aa18.26■□□□□ 0.51
SNX11-201ENST00000359238 ZNF366Q8N895 744 aa18.26■□□□□ 0.51
SNX11-201ENST00000359238 HMGCLL1Q8TB92 370 aa18.26■□□□□ 0.51
SNX11-201ENST00000359238 FBXL20Q96IG2 436 aa18.26■□□□□ 0.51
SNX11-201ENST00000359238 CTRCQ99895 268 aa18.26■□□□□ 0.51
SNX11-201ENST00000359238 PIKFYVEQ9Y2I7 2098 aa18.26■□□□□ 0.51
SNX11-201ENST00000359238 RNF103-CHMP3A0A140T963 221 aa18.26■□□□□ 0.51
SNX11-201ENST00000359238 NPIPB15A6NHN6 443 aaPredicted RBP18.26■□□□□ 0.51
SNX11-201ENST00000359238 STX7O15400 261 aaKnown RBP18.26■□□□□ 0.51
SNX11-201ENST00000359238 TPD52L2O43399 206 aaKnown RBP18.26■□□□□ 0.51
SNX11-201ENST00000359238 NIPSNAP2O75323 286 aa18.26■□□□□ 0.51
SNX11-201ENST00000359238 SRP72O76094 671 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms