RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 LIPHQ8WWY8 451 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 ANKS1AQ92625 1134 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 LRRC58Q96CX6 371 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 PHB2Q99623 299 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 PDCD2LQ9BRP1 358 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 ITGB1BP2Q9UKP3 347 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 BAIAP2Q9UQB8 552 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 DIP2BQ9P265 1576 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 B4GALT2O60909 372 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 KRT36O76013 467 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 TM7SF2O76062 418 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 UROSP10746 265 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 ATP5A1P25705 553 aaKnown RBP9.63□□□□□ -0.87
CHD3-202ENST00000358181 TTPAP49638 278 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 POLR2HP52434 150 aaKnown RBP9.63□□□□□ -0.87
CHD3-202ENST00000358181 DUS1LQ6P1R4 473 aaKnown RBP9.63□□□□□ -0.87
CHD3-202ENST00000358181 GPRIN3Q6ZVF9 776 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 RANBP3LQ86VV4 465 aaPredicted RBP9.63□□□□□ -0.87
CHD3-202ENST00000358181 SLC26A11Q86WA9 606 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 JAGN1Q8N5M9 183 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 OR10T2Q8NGX3 314 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 STAG3L4Q8TBR4 150 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 ZFP3Q96NJ6 502 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 TRPV5Q9NQA5 729 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 GDF3Q9NR23 364 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 CFAP20Q9Y6A4 193 aaKnown RBP9.63□□□□□ -0.87
CHD3-202ENST00000358181 ADAMTS3O15072 1205 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 SULT1B1O43704 296 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 ASGR1P07306 291 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 MAPK12P53778 367 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 LRRC37A5PQ49AS3 106 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 TNFAIP8L3Q5GJ75 292 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 DCST1Q5T197 706 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 HACD2Q6Y1H2 254 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 OR8S1Q8NH09 359 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 CD101Q93033 1021 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 TEFMQ96QE5 360 aaKnown RBP9.63□□□□□ -0.87
CHD3-202ENST00000358181 ROPN1BQ9BZX4 212 aaPredicted RBP9.63□□□□□ -0.87
CHD3-202ENST00000358181 NELFAQ9H3P2 528 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 ROPN1Q9HAT0 212 aaPredicted RBP9.63□□□□□ -0.87
CHD3-202ENST00000358181 CYTH4Q9UIA0 394 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 MFHAS1Q9Y4C4 1052 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 TEX13DA0A0J9YY54 714 aaPredicted RBP9.63□□□□□ -0.87
CHD3-202ENST00000358181 PIGNO95427 931 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 POU2F2P09086 479 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 OR4Q2P0C623 313 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 NR2C1P13056 603 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 ZNF12P17014 697 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 CCR10P46092 362 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 PPP4CP60510 307 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 DDR1Q08345 913 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 ZNF720Q7Z2F6 126 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 ZNF572Q7Z3I7 529 aaPredicted RBP9.63□□□□□ -0.87
CHD3-202ENST00000358181 TCAIMQ8N3R3 496 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 REPS2Q8NFH8 660 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 PNPLA2Q96AD5 504 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 MED28Q9H204 178 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 PPCSQ9HAB8 311 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 GMEB1Q9Y692 573 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 OR6C6A6NF89 314 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 RPLP2P05387 115 aaKnown RBP9.63□□□□□ -0.87
CHD3-202ENST00000358181 EDNRAP25101 427 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 STEAP3Q658P3 488 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 FBXW5Q969U6 566 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 SHDQ96IW2 340 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 ORAI3Q9BRQ5 295 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 DGKBQ9Y6T7 804 aa9.63□□□□□ -0.87
CHD3-202ENST00000358181 COL5A2P05997 1499 aaPredicted RBP9.62□□□□□ -0.87
CHD3-202ENST00000358181 OR5H15A6NDH6 313 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 OR5H14A6NHG9 310 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 OR5H1A6NKK0 313 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 AHCYL1O43865 530 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 IFNGR1P15260 489 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 APLP1P51693 650 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 CRISP1P54107 249 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 RHBDL3P58872 404 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 GPR68Q15743 365 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 LACTB2Q53H82 288 aaPredicted RBP9.62□□□□□ -0.87
CHD3-202ENST00000358181 SH3D19Q5HYK7 790 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 SLC16A9Q7RTY1 509 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 RIOX2Q8IUF8 465 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 POGLUT1Q8NBL1 392 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 SCGB1C1Q8TD33 95 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 RBCK1Q9BYM8 510 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 ZIC2O95409 532 aaPredicted RBP9.62□□□□□ -0.87
CHD3-202ENST00000358181 BCKDHAP12694 445 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 IL7RP16871 459 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 UGT1A1P22309 533 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 FMO3P31513 532 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 PPIGQ13427 754 aaKnown RBP eCLIP9.62□□□□□ -0.875e-6■■□□□ 13.5
CHD3-202ENST00000358181 STK11Q15831 433 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 DLK2Q6UY11 383 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 OR8H1Q8NGG4 311 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 GCDHQ92947 438 aaPredicted RBP9.62□□□□□ -0.87
CHD3-202ENST00000358181 FKBPLQ9UIM3 349 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 PCDHGC3Q9UN70 934 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 MYOCOSA0A1B0GUC4 107 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 FAM234BA2RU67 622 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 CHST10O43529 356 aa9.62□□□□□ -0.87
CHD3-202ENST00000358181 CLPXO76031 633 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms