RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 NECTIN4Q96NY8 510 aa15.08■□□□□ 0.01
LMNA-201ENST00000347559 GOLGA2P5Q9HBQ8 144 aa15.08■□□□□ 0.01
LMNA-201ENST00000347559 FAM25AB3EWG3 89 aa15.08■□□□□ 0
LMNA-201ENST00000347559 FAM25CB3EWG5 89 aa15.08■□□□□ 0
LMNA-201ENST00000347559 FAM25GB3EWG6 89 aa15.08■□□□□ 0
LMNA-201ENST00000347559 WNT10BO00744 389 aa15.08■□□□□ 0
LMNA-201ENST00000347559 OR4F21O95013 312 aa15.08■□□□□ 0
LMNA-201ENST00000347559 MYCLP1P12525 358 aaPredicted RBP15.08■□□□□ 0
LMNA-201ENST00000347559 GRK5P34947 590 aa15.08■□□□□ 0
LMNA-201ENST00000347559 HUNKP57058 714 aa15.08■□□□□ 0
LMNA-201ENST00000347559 IL18R1Q13478 541 aa15.08■□□□□ 0
LMNA-201ENST00000347559 TIGD6Q17RP2 521 aa15.08■□□□□ 0
LMNA-201ENST00000347559 RFX4Q33E94 735 aa15.08■□□□□ 0
LMNA-201ENST00000347559 EFL1Q7Z2Z2 1120 aaKnown RBP15.08■□□□□ 0
LMNA-201ENST00000347559 HORMAD1Q86X24 394 aa15.08■□□□□ 0
LMNA-201ENST00000347559 RAB43Q86YS6 212 aa15.08■□□□□ 0
LMNA-201ENST00000347559 TTC29Q8NA56 475 aaPredicted RBP15.08■□□□□ 0
LMNA-201ENST00000347559 APPL2Q8NEU8 664 aa15.08■□□□□ 0
LMNA-201ENST00000347559 GRPEL2Q8TAA5 225 aa15.08■□□□□ 0
LMNA-201ENST00000347559 OMA1Q96E52 524 aa15.08■□□□□ 0
LMNA-201ENST00000347559 APOL4Q9BPW4 351 aa15.08■□□□□ 0
LMNA-201ENST00000347559 RAPGEFL1Q9UHV5 662 aa15.08■□□□□ 0
LMNA-201ENST00000347559 MIA3Q5JRA6 1907 aa15.08■□□□□ 0
LMNA-201ENST00000347559 UBA6A0AVT1 1052 aaPredicted RBP15.08■□□□□ 0
LMNA-201ENST00000347559 ELOVL7A1L3X0 281 aa15.08■□□□□ 0
LMNA-201ENST00000347559 JUNDP17535 347 aa15.08■□□□□ 0
LMNA-201ENST00000347559 PRKCDQ05655 676 aa15.08■□□□□ 0
LMNA-201ENST00000347559 FADDQ13158 208 aa15.08■□□□□ 0
LMNA-201ENST00000347559 PON2Q15165 354 aa15.08■□□□□ 0
LMNA-201ENST00000347559 INTS6LQ5JSJ4 861 aaKnown RBP15.08■□□□□ 0
LMNA-201ENST00000347559 ERAP2Q6P179 960 aa15.08■□□□□ 0
LMNA-201ENST00000347559 CEP68Q76N32 757 aa15.08■□□□□ 0
LMNA-201ENST00000347559 DPP9Q86TI2 863 aa15.08■□□□□ 0
LMNA-201ENST00000347559 HIPK1Q86Z02 1210 aa15.08■□□□□ 0
LMNA-201ENST00000347559 MMP28Q9H239 520 aa15.08■□□□□ 0
LMNA-201ENST00000347559 KLK14Q9P0G3 267 aa15.08■□□□□ 0
LMNA-201ENST00000347559 NUFIP1Q9UHK0 495 aaKnown RBP15.08■□□□□ 0
LMNA-201ENST00000347559 TSR3Q9UJK0 312 aaKnown RBP15.08■□□□□ 0
LMNA-201ENST00000347559 POLR3HQ9Y535 204 aaPredicted RBP15.08■□□□□ 0
LMNA-201ENST00000347559 ZNF682O95780 498 aa15.07■□□□□ 0
LMNA-201ENST00000347559 KRT6AP02538 564 aa15.07■□□□□ 0
LMNA-201ENST00000347559 KRT6BP04259 564 aa15.07■□□□□ 0
LMNA-201ENST00000347559 RRM2P31350 389 aa15.07■□□□□ 0
LMNA-201ENST00000347559 ADRA1AP35348 466 aa15.07■□□□□ 0
LMNA-201ENST00000347559 SCNN1GP51170 649 aa15.07■□□□□ 0
LMNA-201ENST00000347559 MVKQ03426 396 aa15.07■□□□□ 0
LMNA-201ENST00000347559 PWP1Q13610 501 aa15.07■□□□□ 0
LMNA-201ENST00000347559 STARD3Q14849 445 aa15.07■□□□□ 0
LMNA-201ENST00000347559 TSNQ15631 228 aaKnown RBP15.07■□□□□ 0
LMNA-201ENST00000347559 GTDC1Q4AE62 458 aa15.07■□□□□ 0
LMNA-201ENST00000347559 RANBP10Q6VN20 620 aa15.07■□□□□ 0
LMNA-201ENST00000347559 CRYBG2Q8N1P7 616 aa15.07■□□□□ 0
LMNA-201ENST00000347559 NLGN1Q8N2Q7 840 aa15.07■□□□□ 0
LMNA-201ENST00000347559 PIK3R3Q92569 461 aa15.07■□□□□ 0
LMNA-201ENST00000347559 TBATAQ96M53 351 aa15.07■□□□□ 0
LMNA-201ENST00000347559 DUSP16Q9BY84 665 aa15.07■□□□□ 0
LMNA-201ENST00000347559 BRINP2Q9C0B6 783 aa15.07■□□□□ 0
LMNA-201ENST00000347559 ZIM2Q9NZV7 527 aa15.07■□□□□ 0
LMNA-201ENST00000347559 KLHL20Q9Y2M5 609 aa15.07■□□□□ 0
LMNA-201ENST00000347559 ANKRD31Q8N7Z5 1873 aa15.07■□□□□ 0
LMNA-201ENST00000347559 A0A0U1RQS6 177 aa15.07■□□□□ 0
LMNA-201ENST00000347559 PAPSS2O95340 614 aaPredicted RBP15.07■□□□□ 0
LMNA-201ENST00000347559 NPR3P17342 541 aa15.07■□□□□ 0
LMNA-201ENST00000347559 PPP3CCP48454 512 aa15.07■□□□□ 0
LMNA-201ENST00000347559 NR6A1Q15406 480 aa15.07■□□□□ 0
LMNA-201ENST00000347559 SLC14A2Q15849 920 aa15.07■□□□□ 0
LMNA-201ENST00000347559 FBXO47Q5MNV8 452 aa15.07■□□□□ 0
LMNA-201ENST00000347559 ZNF549Q6P9A3 640 aa15.07■□□□□ 0
LMNA-201ENST00000347559 PRR23CQ6ZRP0 262 aa15.07■□□□□ 0
LMNA-201ENST00000347559 B3GALNT2Q8NCR0 500 aa15.07■□□□□ 0
LMNA-201ENST00000347559 ZNF548Q8NEK5 533 aaPredicted RBP15.07■□□□□ 0
LMNA-201ENST00000347559 UBASH3BQ8TF42 649 aa15.07■□□□□ 0
LMNA-201ENST00000347559 TRNT1Q96Q11 434 aaKnown RBP15.07■□□□□ 0
LMNA-201ENST00000347559 COPS4Q9BT78 406 aa15.07■□□□□ 0
LMNA-201ENST00000347559 SLA2Q9H6Q3 261 aa15.07■□□□□ 0
LMNA-201ENST00000347559 KIF17Q9P2E2 1029 aa15.07■□□□□ 0
LMNA-201ENST00000347559 PGAP2Q9UHJ9 254 aa15.07■□□□□ 0
LMNA-201ENST00000347559 ZNF225Q9UK10 706 aa15.07■□□□□ 0
LMNA-201ENST00000347559 CYP2A7P20853 494 aa15.06■□□□□ 0
LMNA-201ENST00000347559 AKAP5P24588 427 aa15.06■□□□□ 0
LMNA-201ENST00000347559 SERPINH1P50454 418 aaKnown RBP15.06■□□□□ 0
LMNA-201ENST00000347559 SDE2Q6IQ49 451 aa15.06■□□□□ 0
LMNA-201ENST00000347559 NOXA1Q86UR1 476 aa15.06■□□□□ 0
LMNA-201ENST00000347559 P3H2Q8IVL5 708 aa15.06■□□□□ 0
LMNA-201ENST00000347559 CHAC2Q8WUX2 184 aa15.06■□□□□ 0
LMNA-201ENST00000347559 SNAPC3Q92966 411 aa15.06■□□□□ 0
LMNA-201ENST00000347559 NTAN1Q96AB6 310 aa15.06■□□□□ 0
LMNA-201ENST00000347559 ZNF599Q96NL3 588 aa15.06■□□□□ 0
LMNA-201ENST00000347559 VPS35Q96QK1 796 aa15.06■□□□□ 0
LMNA-201ENST00000347559 ATOH8Q96SQ7 321 aa15.06■□□□□ 0
LMNA-201ENST00000347559 GORASP2Q9H8Y8 452 aa15.06■□□□□ 0
LMNA-201ENST00000347559 CCNB1IP1Q9NPC3 277 aa15.06■□□□□ 0
LMNA-201ENST00000347559 PEX16Q9Y5Y5 336 aa15.06■□□□□ 0
LMNA-201ENST00000347559 MICAL3Q7RTP6 2002 aa15.06■□□□□ 0
LMNA-201ENST00000347559 A0A0G2JMP0 313 aa15.06■□□□□ 0
LMNA-201ENST00000347559 A0A0X1KG70 313 aa15.06■□□□□ 0
LMNA-201ENST00000347559 PNMA8CA0A1B0GUJ8 204 aa15.06■□□□□ 0
LMNA-201ENST00000347559 H3BQ06 376 aaPredicted RBP15.06■□□□□ 0
LMNA-201ENST00000347559 M0R082 166 aa15.06■□□□□ 0
LMNA-201ENST00000347559 CDC7O00311 574 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms