RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 DPEP2Q9H4A9 486 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 ERVMER34-1Q9H9K5 563 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 XPR1Q9UBH6 696 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 GRID1Q9ULK0 1009 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 SMG5Q9UPR3 1016 aaKnown RBP18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 KLHL33A6NCF5 533 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 TARM1B6A8C7 271 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 SDC3O75056 442 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 MATN4O95460 622 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 CTSEP14091 401 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 VCLP18206 1134 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 NR1D1P20393 614 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 HOXD12P35452 270 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 ETV4P43268 484 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 BLKP51451 505 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 WDR4P57081 412 aaKnown RBP18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 ACAP2Q15057 778 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 DUS1LQ6P1R4 473 aaKnown RBP18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 PDZD3Q86UT5 571 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 ARMC2Q8NEN0 867 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 MGARPQ8TDB4 240 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 LMX1AQ8TE12 382 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 SKA2Q8WVK7 121 aaPredicted RBP18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 ASB11Q8WXH4 323 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 LOXL4Q96JB6 756 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 TSNARE1Q96NA8 513 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 ATOH8Q96SQ7 321 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 INSM2Q96T92 566 aaPredicted RBP18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 TFB2MQ9H5Q4 396 aaKnown RBP18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 UCKL1Q9NWZ5 548 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 CPSF2Q9P2I0 782 aaKnown RBP18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 ACSL5Q9ULC5 683 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 CFAP20Q9Y6A4 193 aaKnown RBP18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 DMDP11532 3685 aa18.56■□□□□ 0.56
CHMP4A-201ENST00000347519 PRAMEF33A0A0G2JMD5 474 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 A6NCN8 305 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 PDZK1P1A8MUH7 402 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 PIAS2O75928 621 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 IDSP22304 550 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 MPLP40238 635 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 BDKRB1P46663 353 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 ILF3Q12906 894 aaKnown RBP eCLIP18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 BNIP3Q12983 259 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 PHKG1Q16816 387 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 PPP1R3AQ16821 1122 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 CCSMST1Q4G0I0 132 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 TRIM61Q5EBN2 209 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 SLC23A3Q6PIS1 610 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 ZC3H14Q6PJT7 736 aaKnown RBP18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 TAF8Q7Z7C8 310 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 LCA5Q86VQ0 697 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 SUMF1Q8NBK3 374 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 PHC3Q8NDX5 983 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 ZNF548Q8NEK5 533 aaPredicted RBP18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 OR2I1PQ8NGU4 316 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 PHOX2BQ99453 314 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 GSDMCQ9BYG8 508 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 IL21RQ9HBE5 538 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 TAAR2Q9P1P5 351 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 VPS13AQ96RL7 3174 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 TRBV23OR9-2A0A075B6M9 112 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 NEMP2A6NFY4 417 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 ARHGEF33A8MVX0 844 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 GFYI3L273 518 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 UBXN8O00124 270 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 PSIP1O75475 530 aaKnown RBP18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 ATP1A2P50993 1020 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 IL9RQ01113 521 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 PLOD1Q02809 727 aaPredicted RBP18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 ZNF423Q2M1K9 1284 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 TCEAL6Q6IPX3 200 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 KLC3Q6P597 504 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 ABRAXAS1Q6UWZ7 409 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 UBE2R2Q712K3 238 aaPredicted RBP18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 CEP76Q8TAP6 659 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 EXT2Q93063 718 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 TCEAL3Q969E4 200 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 ELF4Q99607 663 aaPredicted RBP18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 MRPL57Q9BQC6 102 aaKnown RBP18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 IQCGQ9H095 443 aaKnown RBP18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 MRPL46Q9H2W6 279 aaKnown RBP18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 FAM86C1Q9NVL1 165 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 CIDEBQ9UHD4 219 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 SLC6A14Q9UN76 642 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 PDE10AQ9Y233 779 aa18.55■□□□□ 0.56
CHMP4A-201ENST00000347519 RALGAPA1Q6GYQ0 2036 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 OR52A4PA6NMU1 304 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 G3V2L1 256 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 KERAO60938 352 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 ZWINTO95229 277 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 SLC35G4P0C7Q5 338 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 DHRS4L1P0CG22 281 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 MTHFD2P13995 350 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 DPP6P42658 865 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 RXRGP48443 463 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 SLC18A1P54219 525 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 HNRNPKP61978 463 aaKnown RBP eCLIP18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 RPE65Q16518 533 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 HLA-BQ31612 363 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms