RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 IL11RAQ14626 422 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 ANKS6Q68DC2 871 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 KIAA0930Q6ICG6 404 aaPredicted RBP15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 TBC1D21Q8IYX1 336 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 CALML6Q8TD86 181 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 JPH3Q8WXH2 748 aaPredicted RBP15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 KIAA1143Q96AT1 154 aaPredicted RBP15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 MFSD3Q96ES6 412 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 SERPINB12Q96P63 405 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 DDX47Q9H0S4 455 aaKnown RBP15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 CCDC68Q9H2F9 335 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 PCYOX1Q9UHG3 505 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 PRSS21Q9Y6M0 314 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 SMAPO00193 183 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 AVILO75366 819 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 ITGB6P18564 788 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 OGNP20774 298 aaKnown RBP15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 CDH3P22223 829 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 SHMT2P34897 504 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 EIF3BP55884 814 aaKnown RBP15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 DNAJC21Q5F1R6 531 aaKnown RBP15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 ARHGAP40Q5TG30 622 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 ANKRD22Q5VYY1 191 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 CES3Q6UWW8 571 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 OTOAQ7RTW8 1153 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 BPHLQ86WA6 291 aaPredicted RBP15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 AMIGO1Q86WK6 493 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 RASGRP3Q8IV61 690 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 KLHL7Q8IXQ5 586 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 LMNTD2Q8IXW0 634 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 PHC3Q8NDX5 983 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 SKA2Q8WVK7 121 aaPredicted RBP15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 KLHL6Q8WZ60 621 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 SLCO2A1Q92959 643 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 ZNF669Q96BR6 464 aaPredicted RBP15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 FOPNLQ96NB1 174 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 OR6C1Q96RD1 312 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 HGH1Q9BTY7 390 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 EFHD1Q9BUP0 239 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 TFB2MQ9H5Q4 396 aaKnown RBP15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 PRORYQ9H606 182 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 FANCEQ9HB96 536 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 SOHLH2Q9NX45 425 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 RPS6KL1Q9Y6S9 549 aa15.35■□□□□ 0.05
TSPAN4-201ENST00000346501 PIKFYVEQ9Y2I7 2098 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 SLC5A10A0PJK1 596 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 C2orf74A8MZ97 194 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 TMEM63AO94886 807 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 ZBTB11O95625 1053 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 NELFEP18615 380 aaKnown RBP15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 POLR2CP19387 275 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 RPS3P23396 243 aaKnown RBP eCLIP15.34■□□□□ 0.056e-8■■■■■ 37.4
TSPAN4-201ENST00000346501 CASQ1P31415 396 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 CSE1LP55060 971 aaKnown RBP15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 HSD11B2P80365 405 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 DR1Q01658 176 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 PRKG2Q13237 762 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 PTK6Q13882 451 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 ANKRD20A4Q4UJ75 823 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 NEPROQ6NW34 567 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 LDB1Q86U70 411 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 CAND1Q86VP6 1230 aaKnown RBP15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 PPP1R3BQ86XI6 285 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 CACNA2D3Q8IZS8 1091 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 NLGN4XQ8N0W4 816 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 RAB42Q8N4Z0 105 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 BMPERQ8N8U9 685 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 NLGN4YQ8NFZ3 816 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 UBL7Q96S82 380 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 MAP3K3Q99759 626 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 CTRCQ99895 268 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 NAT9Q9BTE0 207 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 CPNE5Q9HCH3 593 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 MARCH4Q9P2E8 410 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 RARRES3Q9UL19 164 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 TDRKHQ9Y2W6 561 aaKnown RBP15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 NEU2Q9Y3R4 380 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 FAM208BQ5VWN6 2430 aa15.34■□□□□ 0.05
TSPAN4-201ENST00000346501 AHCTF1Q8WYP5 2266 aa15.33■□□□□ 0.05
TSPAN4-201ENST00000346501 E5RI56 91 aa15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 DNALI1O14645 258 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 KIF1CO43896 1103 aaKnown RBP15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 ESR1P03372 595 aa15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 MAP4P27816 1152 aaKnown RBP15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 RHDQ02161 417 aa15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 SEMA3AQ14563 771 aa15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 TGIF1Q15583 401 aa15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 LONRF1Q17RB8 773 aa15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 ZNF658BQ4V348 819 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 IZUMO3Q5VZ72 239 aa15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 DTX1Q86Y01 620 aa15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 SLC22A15Q8IZD6 547 aa15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 PDIK1LQ8N165 341 aa15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 NAT8LQ8N9F0 302 aa15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 OR52E1Q8NGJ3 308 aa15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 OR5K2Q8NHB8 316 aa15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 STAMBPL1Q96FJ0 436 aa15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 ULBP3Q9BZM4 244 aa15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 C1GALT1Q9NS00 363 aa15.33■□□□□ 0.04
TSPAN4-201ENST00000346501 INTS10Q9NVR2 710 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms