RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 KCNK4Q9NYG8 393 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 POLG2Q9UHN1 485 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 TRMT6Q9UJA5 497 aaKnown RBP11.57□□□□□ -0.56
SNCA-202ENST00000345009 VWA7Q9Y334 891 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 RNF215Q9Y6U7 377 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 UNC13CQ8NB66 2214 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 A0A087WUV0 522 aaPredicted RBP11.56□□□□□ -0.56
SNCA-202ENST00000345009 LY6G6EA0A0G2JKS1 128 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 OR52A4PA6NMU1 304 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 TMX2-CTNND1H3BSU7 103 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 EIF3FO00303 357 aaPredicted RBP11.56□□□□□ -0.56
SNCA-202ENST00000345009 OPA1O60313 960 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 NIPSNAP2O75323 286 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 GPC4O75487 556 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 ACSL3O95573 720 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 EML2O95834 649 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 CBSLP0DN79 551 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 MYF5P13349 255 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 ENO3P13929 434 aaPredicted RBP11.56□□□□□ -0.56
SNCA-202ENST00000345009 BRAFP15056 766 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 CD9P21926 228 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 ECHS1P30084 290 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 SPRP35270 261 aaPredicted RBP11.56□□□□□ -0.56
SNCA-202ENST00000345009 CBSP35520 551 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 PREPP48147 710 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 RGS4P49798 205 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 PMS2P54278 862 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 EPHA4P54764 986 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 CSE1LP55060 971 aaKnown RBP11.56□□□□□ -0.56
SNCA-202ENST00000345009 RP1P56715 2156 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 UBE2IP63279 158 aaKnown RBP11.56□□□□□ -0.56
SNCA-202ENST00000345009 CLCA4Q14CN2 919 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 KBTBD12Q3ZCT8 623 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 ZNF658BQ4V348 819 aaPredicted RBP11.56□□□□□ -0.56
SNCA-202ENST00000345009 ZNF789Q5FWF6 425 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.56□□□□□ -0.56
SNCA-202ENST00000345009 GRTP1Q5TC63 336 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 FAM45BPQ6NSW5 357 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 CCNI2Q6ZMN8 369 aaPredicted RBP11.56□□□□□ -0.56
SNCA-202ENST00000345009 TMEM26Q6ZUK4 368 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 TAOK1Q7L7X3 1001 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 ZNF438Q7Z4V0 828 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 ZC3HC1Q86WB0 502 aaKnown RBP11.56□□□□□ -0.56
SNCA-202ENST00000345009 SLC22A15Q8IZD6 547 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 GALNT15Q8N3T1 639 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 PPM1NQ8N819 430 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 Q8N9G6 341 aaPredicted RBP11.56□□□□□ -0.56
SNCA-202ENST00000345009 FAM45AQ8TCE6 357 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 MAGEC3Q8TD91 643 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 PATE1Q8WXA2 126 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 TSPAN17Q96FV3 270 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 FERD3LQ96RJ6 166 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 GFM1Q96RP9 751 aaKnown RBP11.56□□□□□ -0.56
SNCA-202ENST00000345009 INSM2Q96T92 566 aaPredicted RBP11.56□□□□□ -0.56
SNCA-202ENST00000345009 OR52A5Q9H2C5 316 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 TRIT1Q9H3H1 467 aaKnown RBP11.56□□□□□ -0.56
SNCA-202ENST00000345009 CDC42EP4Q9H3Q1 356 aaKnown RBP11.56□□□□□ -0.56
SNCA-202ENST00000345009 RHOJQ9H4E5 214 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 SLC40A1Q9NP59 571 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 NINJ2Q9NZG7 142 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 SCHIP1Q9P0W5 487 aaPredicted RBP11.56□□□□□ -0.56
SNCA-202ENST00000345009 ZNF624Q9P2J8 865 aaPredicted RBP11.56□□□□□ -0.56
SNCA-202ENST00000345009 ASF1AQ9Y294 204 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 WDR37Q9Y2I8 494 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 DHRS7Q9Y394 339 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 U3KQA8 63 aa11.56□□□□□ -0.56
SNCA-202ENST00000345009 LILRA5A6NI73 299 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 PPM1DO15297 605 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 DUX1O43812 170 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 TCEA3O75764 348 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 AMD1P17707 334 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 GABRB3P28472 473 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 PDHA2P29803 388 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 CCNFP41002 786 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 CLCN7P51798 805 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 SPIDRQ14159 915 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 NR1D2Q14995 579 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 PLCL1Q15111 1095 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 KLHL38Q2WGJ6 581 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 AMZ1Q400G9 498 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 LGSNQ5TDP6 509 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 HECTD2Q5U5R9 776 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 WDR93Q6P2C0 686 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 ZNF549Q6P9A3 640 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 UNC5DQ6UXZ4 953 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 NEK10Q6ZWH5 1172 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 SPRED1Q7Z699 444 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 SLCO6A1Q86UG4 719 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 PIM3Q86V86 326 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 TMPRSS12Q86WS5 348 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 TBC1D21Q8IYX1 336 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 RAB42Q8N4Z0 105 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 LILRA3Q8N6C8 439 aaPredicted RBP11.55□□□□□ -0.56
SNCA-202ENST00000345009 ACVR1CQ8NER5 493 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 ADAMTS14Q8WXS8 1223 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 GRAMD1AQ96CP6 724 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 RMDN2Q96LZ7 410 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 GPR21Q99679 349 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 ZMYND15Q9H091 742 aa11.55□□□□□ -0.56
SNCA-202ENST00000345009 LRRN3Q9H3W5 708 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms