RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 PAQR9Q6ZVX9 377 aa12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 SLC34A3Q8N130 599 aa12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 SLC15A4Q8N697 577 aa12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 PCSK9Q8NBP7 692 aaKnown RBP12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 HERC2P3Q9BVR0 1158 aa12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 CTPS2Q9NRF8 586 aa12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 PER2O15055 1255 aa12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 TULP3O75386 442 aa12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 CCNKO75909 580 aa12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 ALDOCP09972 364 aaKnown RBP12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 ACADVLP49748 655 aa12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 ST8SIA6P61647 398 aa12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 FAM110CQ1W6H9 321 aa12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 GTDC1Q4AE62 458 aa12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 ANKRD26P1Q6NSI1 321 aa12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 MBOAT1Q6ZNC8 495 aa12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 GPR65Q8IYL9 337 aa12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 FAM110BQ8TC76 370 aa12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 KIAA1191Q96A73 305 aa12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 PLAC1Q9HBJ0 212 aa12.22□□□□□ -0.45
SNRNP48-201ENST00000342415 GLYATL1P3A0A0U1RQE8 302 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 SAP18O00422 153 aaKnown RBP12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 LSM1O15116 133 aaKnown RBP12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 CLPXO76031 633 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 CLDN9O95484 217 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 IGSF6O95976 241 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 GBAP04062 536 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 PGRP06401 933 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 ALDH3A2P51648 485 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 CDH12P55289 794 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 RPL26P61254 145 aaKnown RBP12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 CHIT1Q13231 466 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 NAE1Q13564 534 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 PTPRRQ15256 657 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 ZNF792Q3KQV3 632 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 GDF6Q6KF10 455 aaPredicted RBP12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 PSAPL1Q6NUJ1 521 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 ENPP6Q6UWR7 440 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 TRIM69Q86WT6 500 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 ZNF280BQ86YH2 543 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 TTC9BQ8N6N2 239 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 ZNF614Q8N883 585 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 S100ZQ8WXG8 99 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 NELL1Q92832 810 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 PCDHB8Q9UN66 801 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 TLR6Q9Y2C9 796 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 MAP4K5Q9Y4K4 846 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 SH3PXD2BA1X283 911 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 SMIM30A4D0T7 59 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 TPST2O60704 377 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 F2P00734 622 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 LRG1P02750 347 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 ZNF26P17031 533 aaPredicted RBP12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 C1DQ13901 141 aaKnown RBP12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 PIK3R6Q5UE93 754 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 IFNLR1Q8IU57 520 aaPredicted RBP12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 VANGL1Q8TAA9 524 aaPredicted RBP12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 MYO19Q96H55 970 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 KCNC2Q96PR1 638 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 RANBP9Q96S59 729 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 COPS4Q9BT78 406 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 SAMD4AQ9UPU9 718 aaKnown RBP12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 NME7Q9Y5B8 376 aa12.21□□□□□ -0.45
SNRNP48-201ENST00000342415 EFCAB9A8MZ26 197 aa12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 HNRNPCL2B2RXH8 293 aa12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 TMCC2O75069 709 aa12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 TNFRSF21O75509 655 aa12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 FYNP06241 537 aa12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 TUFMP49411 452 aaKnown RBP12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 MARCH8Q5T0T0 291 aa12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 CES5AQ6NT32 575 aa12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 AKAP14Q86UN6 197 aa12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 SLC22A16Q86VW1 577 aa12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 TMEM199Q8N511 208 aa12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 PACRGLQ8N7B6 248 aa12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 FRS2Q8WU20 508 aa12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 IMP4Q96G21 291 aaKnown RBP12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 ZBED3Q96IU2 234 aaPredicted RBP12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 IL12RB2Q99665 862 aa12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 SYT17Q9BSW7 474 aa12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 SMOC2Q9H3U7 446 aa12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 C1orf109Q9NX04 203 aa12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 DYRK1BQ9Y463 629 aa12.21□□□□□ -0.46
SNRNP48-201ENST00000342415 SOCS7O14512 581 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 IDH3BO43837 385 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 OR10H3O60404 316 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 CLDN11O75508 207 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 PRKAR2AP13861 404 aaKnown RBP12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 BMXP51813 675 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 KCNA10Q16322 511 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 KIAA0319Q5VV43 1072 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 BLOC1S3Q6QNY0 202 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 ZNF597Q96LX8 424 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 TCF25Q9BQ70 676 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 ARAP2Q8WZ64 1704 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 FAM220BPB1ANY3 271 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 H3BMQ9 156 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 MITFO75030 526 aaPredicted RBP12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 FABP3P05413 133 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 SMIM18P0DKX4 95 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms