RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 SNAP47Q5SQN1 464 aa15□□□□□ -0.01
VAPA-201ENST00000340541 NAPRTQ6XQN6 538 aa15□□□□□ -0.01
VAPA-201ENST00000340541 DTX1Q86Y01 620 aa15□□□□□ -0.01
VAPA-201ENST00000340541 ELMO1Q92556 727 aa15□□□□□ -0.01
VAPA-201ENST00000340541 USP7Q93009 1102 aa15□□□□□ -0.01
VAPA-201ENST00000340541 C9orf72Q96LT7 481 aa15□□□□□ -0.01
VAPA-201ENST00000340541 ZMYND15Q9H091 742 aa15□□□□□ -0.01
VAPA-201ENST00000340541 FOXJ2Q9P0K8 574 aa15□□□□□ -0.01
VAPA-201ENST00000340541 EPHA6Q9UF33 1036 aa15□□□□□ -0.01
VAPA-201ENST00000340541 KLHL3Q9UH77 587 aa15□□□□□ -0.01
VAPA-201ENST00000340541 ASIC3Q9UHC3 531 aa15□□□□□ -0.01
VAPA-201ENST00000340541 ANAPC5Q9UJX4 755 aa15□□□□□ -0.01
VAPA-201ENST00000340541 MAGEB16A2A368 324 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 IQCF5A8MTL0 148 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 B4E171 279 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 PRMT5O14744 637 aaPredicted RBP14.99□□□□□ -0.01
VAPA-201ENST00000340541 TP73O15350 636 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 KIF1CO43896 1103 aaKnown RBP14.99□□□□□ -0.01
VAPA-201ENST00000340541 RPS3P23396 243 aaKnown RBP eCLIP14.99□□□□□ -0.011e-18■■■□□ 15.9
VAPA-201ENST00000340541 ACADLP28330 430 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 CCR7P32248 378 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 CSTF2P33240 577 aaKnown RBP eCLIP14.99□□□□□ -0.01
VAPA-201ENST00000340541 PPARGP37231 505 aaPredicted RBP14.99□□□□□ -0.01
VAPA-201ENST00000340541 TSPAN7P41732 249 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 PAFAH1B1P43034 410 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 MAPK10P53779 464 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 BOP1Q14137 746 aaKnown RBP14.99□□□□□ -0.01
VAPA-201ENST00000340541 MANEAQ5SRI9 462 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 IZUMO3Q5VZ72 239 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 CASC4Q6P4E1 433 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 SYDE1Q6ZW31 735 aaPredicted RBP14.99□□□□□ -0.01
VAPA-201ENST00000340541 HOOK3Q86VS8 718 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 LPGAT1Q92604 370 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 ZNF669Q96BR6 464 aaPredicted RBP14.99□□□□□ -0.01
VAPA-201ENST00000340541 TGM7Q96PF1 710 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 NRTNQ99748 197 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 TRIM51Q9BSJ1 452 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 CARD6Q9BX69 1037 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 SIDT1Q9NXL6 827 aaKnown RBP14.99□□□□□ -0.01
VAPA-201ENST00000340541 IL1RAPL1Q9NZN1 696 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 SAMD15Q9P1V8 674 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 CDYLQ9Y232 598 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 PCDHGA3Q9Y5H0 932 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 SDK2Q58EX2 2172 aa14.99□□□□□ -0.01
VAPA-201ENST00000340541 EFCAB7A8K855 629 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 TOX3O15405 576 aaPredicted RBP14.98□□□□□ -0.01
VAPA-201ENST00000340541 TTI1O43156 1089 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 ITGB6P18564 788 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 OGNP20774 298 aaKnown RBP14.98□□□□□ -0.01
VAPA-201ENST00000340541 NDUFS1P28331 727 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 DHX34Q14147 1143 aaKnown RBP14.98□□□□□ -0.01
VAPA-201ENST00000340541 BRD3Q15059 726 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 TGIF1Q15583 401 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 LINC00303Q3SY05 128 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 MSS51Q4VC12 460 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 CTSL3PQ5NE16 218 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 NEPROQ6NW34 567 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 SYT10Q6XYQ8 523 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 CENPUQ71F23 418 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 PRSS42Q7Z5A4 293 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 KRT222Q8N1A0 295 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 EXD3Q8N9H8 876 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 PHC3Q8NDX5 983 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 TFGQ92734 400 aaPredicted RBP14.98□□□□□ -0.01
VAPA-201ENST00000340541 RUNDC3BQ96NL0 473 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 BIRC8Q96P09 236 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 TAAR9Q96RI9 348 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 SEMA5BQ9P283 1151 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 HEBP2Q9Y5Z4 205 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 RPS6KL1Q9Y6S9 549 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 COLEC10Q9Y6Z7 277 aa14.98□□□□□ -0.01
VAPA-201ENST00000340541 OR5K3A6NET4 321 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 IFRD1O00458 451 aaPredicted RBP14.97□□□□□ -0.01
VAPA-201ENST00000340541 GPC4O75487 556 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 NDUFS3O75489 264 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 BANF1O75531 89 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 USP1O94782 785 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 PAMP19021 973 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 AOAHP28039 575 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 CASQ1P31415 396 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 MC2RQ01718 297 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 PLOD1Q02809 727 aaPredicted RBP14.97□□□□□ -0.01
VAPA-201ENST00000340541 KCNC4Q03721 635 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 PLCL1Q15111 1095 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 MRNIPQ6NTE8 343 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 HIBCHQ6NVY1 386 aaPredicted RBP14.97□□□□□ -0.01
VAPA-201ENST00000340541 IRGCQ6NXR0 463 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 FAM92BQ6ZTR7 304 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 PCGF5Q86SE9 256 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 LRRC6Q86X45 466 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 CILP2Q8IUL8 1156 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 VRK3Q8IV63 474 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 SLC22A15Q8IZD6 547 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 ACVR1CQ8NER5 493 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 KLHL6Q8WZ60 621 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 ART4Q93070 314 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 STAMBPL1Q96FJ0 436 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 ZDHHC12Q96GR4 267 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 FERD3LQ96RJ6 166 aa14.97□□□□□ -0.01
VAPA-201ENST00000340541 TCF12Q99081 682 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms