RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 GPR75-ASB3A0A0A6YYF3 556 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ATP6V1G2-DDX39BF2Z307 99 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 MAP3K6O95382 1288 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 IL1BP01584 269 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CLUP10909 449 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CETPP11597 493 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SLC12A3P55017 1021 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 GDPD1Q8N9F7 314 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ACBD4Q8NC06 268 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ZBED3Q96IU2 234 aaPredicted RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 GON7Q9BXV9 100 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SLC29A3Q9BZD2 475 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 MAGIXQ9H6Y5 334 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 TAS2R9Q9NYW1 312 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 GABRDO14764 452 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 HCN1O60741 890 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 PEX14O75381 377 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CDKN2CP42773 168 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF81P51508 661 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 XKP51811 444 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 MANFP55145 182 aaKnown RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CDH13P55290 713 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 MRPS10P82664 201 aaKnown RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CYP4F8P98187 520 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 AADACL4Q5VUY2 407 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 DNM1P34Q6PK57 102 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 RELL1Q8IUW5 271 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 WDSUB1Q8N9V3 476 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SLC7A13Q8TCU3 470 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SHC3Q92529 594 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 DMRTB1Q96MA1 342 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ORAI2Q96SN7 254 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CAPN10Q9HC96 672 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 UCKL1Q9NWZ5 548 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 NME7Q9Y5B8 376 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 HEBP2Q9Y5Z4 205 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 NAP1L6A6NFF2 107 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CACNB2Q08289 660 aaPredicted RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 GK2Q14410 553 aaPredicted RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CTXN3Q4LDR2 81 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 KIAA1614Q5VZ46 1190 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 GALNT7Q86SF2 657 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 RPLP0P6Q8NHW5 317 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 FCAMRQ8WWV6 532 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SYT15Q9BQS2 421 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CRTAPO75718 401 aaPredicted RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 UBXN7O94888 489 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF182P17025 639 aaPredicted RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CD83Q01151 205 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ANKFN1Q8N957 763 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 MED30Q96HR3 178 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 BTBD1Q9H0C5 482 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SNTG1Q9NSN8 517 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 OXSMQ9NWU1 459 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 OR10H1Q9Y4A9 318 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 NFASCO94856 1347 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SHPRHQ149N8 1683 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 FXYD6-FXYD2A0A087WZ82 144 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SLC33A1O00400 549 aaPredicted RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 KCNA5P22460 613 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CLCN4P51793 760 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 JAM2P57087 298 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 PSMA6P60900 246 aaKnown RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ERVK-8P63133 956 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SEC23AQ15436 765 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CARTPTQ16568 116 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 QPCTQ16769 361 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 GXYLT1Q4G148 440 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SLC9B1Q4ZJI4 515 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 LRRC55Q6ZSA7 311 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 USP49Q70CQ1 688 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ADGRG2Q8IZP9 1017 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 TMEM199Q8N511 208 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 OR51D1Q8NGF3 324 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 FAM151AQ8WW52 585 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 FXYD6Q9H0Q3 95 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 C11orf16Q9NQ32 467 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CNTN6Q9UQ52 1028 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 H3BM21 787 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ACKR2O00590 384 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 APBA3O96018 575 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 RENP00797 406 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 IGFALSP35858 605 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CD86P42081 329 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 CRISP3P54108 245 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SLC3A1Q07837 685 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 MKRN4PQ13434 485 aaPredicted RBP5.44□□□□□ -1.54
PTPRB-202ENST00000334414 GTF2H2Q13888 395 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 FGL2Q14314 439 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 SSX2Q16385 188 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 GTF2H2CQ6P1K8 395 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 DCLRE1AQ6PJP8 1040 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF34Q8IZ26 560 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 KCNS3Q9BQ31 491 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 MTG2Q9H4K7 406 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 BRD7Q9NPI1 651 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 DNMT3LQ9UJW3 386 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 VWA7Q9Y334 891 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 COL1A2P08123 1366 aa5.44□□□□□ -1.54
PTPRB-202ENST00000334414 GXYLT2A0PJZ3 443 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms