RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 SLC18A2Q05940 514 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 PRKG2Q13237 762 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 TEAD4Q15561 434 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 KANSL1Q7Z3B3 1105 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 SLC22A15Q8IZD6 547 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 RIBC1Q8N443 379 aaPredicted RBP16.13■□□□□ 0.17
SHOX-201ENST00000334060 ESAMQ96AP7 390 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 ZNF514Q96K75 400 aaPredicted RBP16.13■□□□□ 0.17
SHOX-201ENST00000334060 ATP6V1G3Q96LB4 118 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 ZNF624Q9P2J8 865 aaPredicted RBP16.13■□□□□ 0.17
SHOX-201ENST00000334060 GRID1Q9ULK0 1009 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 BTBD3Q9Y2F9 522 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 ACOT9Q9Y305 439 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 ASB1Q9Y576 335 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 RALGAPA1Q6GYQ0 2036 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 NCF1BA6NI72 391 aaPredicted RBP16.13■□□□□ 0.17
SHOX-201ENST00000334060 NCF1CA8MVU1 366 aaPredicted RBP16.13■□□□□ 0.17
SHOX-201ENST00000334060 H3BM21 787 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 BTN3A1O00481 513 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 ARHGAP33O14559 1287 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 TOR1BO14657 336 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 AQP9O43315 295 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 TYROBPO43914 113 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 NCF1P14598 390 aaPredicted RBP16.13■□□□□ 0.17
SHOX-201ENST00000334060 TFEBP19484 476 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 TGM1P22735 817 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 CNTFP26441 200 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 N4BP2L1Q5TBK1 243 aaPredicted RBP16.13■□□□□ 0.17
SHOX-201ENST00000334060 SBSNQ6UWP8 590 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 RPS27LQ71UM5 84 aaKnown RBP16.13■□□□□ 0.17
SHOX-201ENST00000334060 ISCA2Q86U28 154 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 TMEM159Q96B96 161 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 MTBPQ96DY7 904 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 RMI1Q9H9A7 625 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 IMP3Q9NV31 184 aaKnown RBP16.13■□□□□ 0.17
SHOX-201ENST00000334060 TRNAU1APQ9NX07 287 aaKnown RBP16.13■□□□□ 0.17
SHOX-201ENST00000334060 SUSD2Q9UGT4 822 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 SLC6A14Q9UN76 642 aa16.13■□□□□ 0.17
SHOX-201ENST00000334060 LRRC14BA6NHZ5 514 aa16.12■□□□□ 0.17
SHOX-201ENST00000334060 ARHGEF33A8MVX0 844 aa16.12■□□□□ 0.17
SHOX-201ENST00000334060 APOA4P06727 396 aa16.12■□□□□ 0.17
SHOX-201ENST00000334060 EPHA8P29322 1005 aaPredicted RBP16.12■□□□□ 0.17
SHOX-201ENST00000334060 DMPKQ09013 629 aa16.12■□□□□ 0.17
SHOX-201ENST00000334060 LAIR1Q6GTX8 287 aa16.12■□□□□ 0.17
SHOX-201ENST00000334060 TAOK1Q7L7X3 1001 aa16.12■□□□□ 0.17
SHOX-201ENST00000334060 FSTL5Q8N475 847 aaPredicted RBP16.12■□□□□ 0.17
SHOX-201ENST00000334060 FAM46DQ8NEK8 389 aa16.12■□□□□ 0.17
SHOX-201ENST00000334060 TCP10LQ8TDR4 215 aa16.12■□□□□ 0.17
SHOX-201ENST00000334060 ASZ1Q8WWH4 475 aa16.12■□□□□ 0.17
SHOX-201ENST00000334060 C12orf66Q96MD2 445 aa16.12■□□□□ 0.17
SHOX-201ENST00000334060 IL17FQ96PD4 163 aa16.12■□□□□ 0.17
SHOX-201ENST00000334060 MECRQ9BV79 373 aa16.12■□□□□ 0.17
SHOX-201ENST00000334060 DPEP2Q9H4A9 486 aa16.12■□□□□ 0.17
SHOX-201ENST00000334060 CXorf56Q9H5V9 222 aa16.12■□□□□ 0.17
SHOX-201ENST00000334060 XPR1Q9UBH6 696 aa16.12■□□□□ 0.17
SHOX-201ENST00000334060 TLK1Q9UKI8 766 aa16.12■□□□□ 0.17
SHOX-201ENST00000334060 COMMD10Q9Y6G5 202 aa16.12■□□□□ 0.17
SHOX-201ENST00000334060 RIF1Q5UIP0 2472 aaKnown RBP16.12■□□□□ 0.17
SHOX-201ENST00000334060 A0A1B0GTQ1 180 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 C17orf113A0A1B0GUU1 675 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 GPR89AB7ZAQ6 455 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 TRIM38O00635 465 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 MAGEC1O60732 1142 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 GPR89BP0CG08 455 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 CD9P21926 228 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 CALRP27797 417 aaKnown RBP16.11■□□□□ 0.17
SHOX-201ENST00000334060 CRABP2P29373 138 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 NBL1P41271 181 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 IL2P60568 153 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 ILF3Q12906 894 aaKnown RBP eCLIP16.11■□□□□ 0.17
SHOX-201ENST00000334060 PPP1R3AQ16821 1122 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 ZNF423Q2M1K9 1284 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 PLEKHS1Q5SXH7 462 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 CAPRIN2Q6IMN6 1127 aaKnown RBP16.11■□□□□ 0.17
SHOX-201ENST00000334060 DCP2Q8IU60 420 aaKnown RBP16.11■□□□□ 0.17
SHOX-201ENST00000334060 MINDY1Q8N5J2 469 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 C2orf73Q8N5S3 287 aaPredicted RBP16.11■□□□□ 0.17
SHOX-201ENST00000334060 GLMNQ92990 594 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 PPCSQ9HAB8 311 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.11■□□□□ 0.17
SHOX-201ENST00000334060 RAB23Q9ULC3 237 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 PRR5-ARHGAP8B1AHC4 643 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 CDX4O14627 284 aaPredicted RBP16.11■□□□□ 0.17
SHOX-201ENST00000334060 LIN7AO14910 233 aaPredicted RBP16.11■□□□□ 0.17
SHOX-201ENST00000334060 KLHL2O95198 593 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 GUCA1CO95843 209 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 LTA4HP09960 611 aaKnown RBP16.11■□□□□ 0.17
SHOX-201ENST00000334060 SLC19A1P41440 591 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 GRB7Q14451 532 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 RPE65Q16518 533 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 LGSNQ5TDP6 509 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 ASCL5Q7RTU5 278 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 TBC1D1Q86TI0 1168 aaPredicted RBP16.11■□□□□ 0.17
SHOX-201ENST00000334060 PDZD3Q86UT5 571 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 ANKRD42Q8N9B4 389 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 MGARPQ8TDB4 240 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 SAP25Q8TEE9 199 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 TSPAN17Q96FV3 270 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 FAM111AQ96PZ2 611 aa16.11■□□□□ 0.17
SHOX-201ENST00000334060 HGH1Q9BTY7 390 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms