RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 FAM50BQ9Y247 325 aa11.68□□□□□ -0.54
LIMK2-202ENST00000333611 AAR2Q9Y312 384 aaKnown RBP11.68□□□□□ -0.54
LIMK2-202ENST00000333611 ZNF638Q14966 1978 aaKnown RBP11.68□□□□□ -0.54
LIMK2-202ENST00000333611 HMBSP08397 361 aa11.68□□□□□ -0.54
LIMK2-202ENST00000333611 LTA4HP09960 611 aaKnown RBP11.68□□□□□ -0.54
LIMK2-202ENST00000333611 ATF6P18850 670 aa11.68□□□□□ -0.54
LIMK2-202ENST00000333611 CYP2A7P20853 494 aa11.68□□□□□ -0.54
LIMK2-202ENST00000333611 DAOAP59103 153 aa11.68□□□□□ -0.54
LIMK2-202ENST00000333611 KCNAB2Q13303 367 aa11.68□□□□□ -0.54
LIMK2-202ENST00000333611 GRM7Q14831 915 aa11.68□□□□□ -0.54
LIMK2-202ENST00000333611 FAM187BQ17R55 369 aa11.68□□□□□ -0.54
LIMK2-202ENST00000333611 GARNL3Q5VVW2 1013 aa11.68□□□□□ -0.54
LIMK2-202ENST00000333611 AMER2Q8N7J2 671 aa11.68□□□□□ -0.54
LIMK2-202ENST00000333611 VANGL1Q8TAA9 524 aaPredicted RBP11.68□□□□□ -0.54
LIMK2-202ENST00000333611 SCAMP5Q8TAC9 235 aa11.68□□□□□ -0.54
LIMK2-202ENST00000333611 PNPT1Q8TCS8 783 aaKnown RBP11.68□□□□□ -0.54
LIMK2-202ENST00000333611 TMEM40Q8WWA1 233 aa11.68□□□□□ -0.54
LIMK2-202ENST00000333611 METTL2AQ96IZ6 378 aaKnown RBP11.68□□□□□ -0.54
LIMK2-202ENST00000333611 SENP8Q96LD8 212 aa11.68□□□□□ -0.54
LIMK2-202ENST00000333611 SORBS1Q9BX66 1292 aaKnown RBP11.68□□□□□ -0.54
LIMK2-202ENST00000333611 HDHD5Q9BXW7 423 aa11.68□□□□□ -0.54
LIMK2-202ENST00000333611 AKTIPQ9H8T0 292 aa11.68□□□□□ -0.54
LIMK2-202ENST00000333611 ABCB9Q9NP78 766 aa11.68□□□□□ -0.54
LIMK2-202ENST00000333611 LIMD1Q9UGP4 676 aa11.68□□□□□ -0.54
LIMK2-202ENST00000333611 NDUFAF1Q9Y375 327 aa11.68□□□□□ -0.54
LIMK2-202ENST00000333611 RGPD3A6NKT7 1758 aaPredicted RBP11.67□□□□□ -0.54
LIMK2-202ENST00000333611 RGPD4Q7Z3J3 1758 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 SUPT3HB4E1H0 165 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 PIP5K1BO14986 540 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 RPS3P23396 243 aaKnown RBP eCLIP11.67□□□□□ -0.54
LIMK2-202ENST00000333611 POU1F1P28069 291 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 GSTM2P28161 218 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 CD86P42081 329 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 INPP1P49441 399 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 ARSFP54793 590 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 EMX1Q04741 257 aaPredicted RBP11.67□□□□□ -0.54
LIMK2-202ENST00000333611 FRG1Q14331 258 aaKnown RBP11.67□□□□□ -0.54
LIMK2-202ENST00000333611 ATP6AP1Q15904 470 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 SPDYE7PQ495Y7 208 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 IDO2Q6ZQW0 420 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 SLC16A12Q6ZSM3 486 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 CCDC149Q6ZUS6 474 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 FBXL6Q8N531 539 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 PARP16Q8N5Y8 322 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 ZBTB44Q8NCP5 570 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 SH3RF2Q8TEC5 729 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 POF1BQ8WVV4 589 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 GLOD4Q9HC38 313 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 FANCFQ9NPI8 374 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 TMEM30AQ9NV96 361 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 CPNE7Q9UBL6 633 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 A0A1W2PRG6 482 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 UBXN8O00124 270 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 NCAM2O15394 837 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 ANXA9O76027 345 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 SLC25A27O95847 323 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 HLA-DQB2P05538 268 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 PRIM2P49643 509 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 FOXA1P55317 472 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 WNT3AP56704 352 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 LIPEQ05469 1076 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 PPIL2Q13356 520 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 EFR3AQ14156 821 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 CTF1Q16619 201 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 SMN1Q16637 294 aaKnown RBP11.67□□□□□ -0.54
LIMK2-202ENST00000333611 TTC23Q5W5X9 447 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 HIPK1Q86Z02 1210 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 MFSD2AQ8NA29 543 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 ENKURQ8TC29 256 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 STON2Q8WXE9 905 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 KAT8Q9H7Z6 458 aaKnown RBP11.67□□□□□ -0.54
LIMK2-202ENST00000333611 CRTAC1Q9NQ79 661 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 RGS18Q9NS28 235 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 SPATA6Q9NWH7 488 aaPredicted RBP11.67□□□□□ -0.54
LIMK2-202ENST00000333611 MALT1Q9UDY8 824 aa11.67□□□□□ -0.54
LIMK2-202ENST00000333611 A0A0G2JMP0 313 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 ASB14A6NK59 587 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 ZNF487B1APH4 448 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 AREL1O15033 823 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 MT-ND2P03891 347 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 PDGFAP04085 211 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 CYP2A6P11509 494 aaPredicted RBP11.66□□□□□ -0.54
LIMK2-202ENST00000333611 FCGR1AP12314 374 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 SLC26A3P40879 764 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 HTR3AP46098 478 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 KCNC1P48547 511 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 C5orf22Q49AR2 442 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 HECTD2Q5U5R9 776 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 SDHAF4Q5VUM1 108 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 KIAA0319Q5VV43 1072 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 KCTD11Q693B1 232 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 PAQR9Q6ZVX9 377 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 METTL23Q86XA0 190 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 EID3Q8N140 333 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 ARRDC4Q8NCT1 418 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 CLHC1Q8NHS4 586 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 ITFG1Q8TB96 612 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 HERVK_113Q902F9 699 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 B3GALT6Q96L58 329 aa11.66□□□□□ -0.54
LIMK2-202ENST00000333611 SMOQ99835 787 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms