RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 POLG2Q9UHN1 485 aa13.66□□□□□ -0.22
LIMS1-201ENST00000332345 CRYL1Q9Y2S2 319 aa13.66□□□□□ -0.22
LIMS1-201ENST00000332345 IGF2RP11717 2491 aa13.66□□□□□ -0.22
LIMS1-201ENST00000332345 DMXL2Q8TDJ6 3036 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 BHMG1C9JSJ3 638 aaPredicted RBP13.65□□□□□ -0.22
LIMS1-201ENST00000332345 AGRPO00253 132 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 RRP8O43159 456 aaKnown RBP13.65□□□□□ -0.22
LIMS1-201ENST00000332345 KDM1AO60341 852 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 GPC4O75487 556 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 CHRM3P20309 590 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 ACADLP28330 430 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 ELK3P41970 407 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 CAPZBP47756 277 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 CSE1LP55060 971 aaKnown RBP13.65□□□□□ -0.22
LIMS1-201ENST00000332345 MRPS25P82663 173 aaKnown RBP13.65□□□□□ -0.22
LIMS1-201ENST00000332345 CTBP1Q13363 440 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 CRYMQ14894 314 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 HSP90AA5PQ58FG0 334 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 DUPD1Q68J44 220 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 DUS1LQ6P1R4 473 aaKnown RBP13.65□□□□□ -0.22
LIMS1-201ENST00000332345 CENPUQ71F23 418 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 KCNMB4Q86W47 210 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 OOSP2Q86WS3 158 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 TBC1D21Q8IYX1 336 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 KRT222Q8N1A0 295 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 MNS1Q8NEH6 495 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 OR4E2Q8NGC2 313 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 KIF18AQ8NI77 898 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 C9orf72Q96LT7 481 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 TGM7Q96PF1 710 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 B3GNT4Q9C0J1 378 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 CCDC68Q9H2F9 335 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 DPH5Q9H2P9 285 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 TRIT1Q9H3H1 467 aaKnown RBP13.65□□□□□ -0.22
LIMS1-201ENST00000332345 TFB2MQ9H5Q4 396 aaKnown RBP13.65□□□□□ -0.22
LIMS1-201ENST00000332345 ASCL3Q9NQ33 180 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 HRASLS2Q9NWW9 162 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 ZC3H7BQ9UGR2 993 aaKnown RBP13.65□□□□□ -0.22
LIMS1-201ENST00000332345 KLHL3Q9UH77 587 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 ASF1AQ9Y294 204 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 PCDHGA7Q9Y5G6 932 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 TEX264Q9Y6I9 313 aa13.65□□□□□ -0.22
LIMS1-201ENST00000332345 MN1Q10571 1320 aaPredicted RBP13.64□□□□□ -0.23
LIMS1-201ENST00000332345 APC2O95996 2303 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 OR6C74A6NCV1 312 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 SRRM3A6NNA2 597 aaPredicted RBP13.64□□□□□ -0.23
LIMS1-201ENST00000332345 CDRT15L2A8MXV6 281 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 E5RI56 91 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 NVLO15381 856 aaKnown RBP13.64□□□□□ -0.23
LIMS1-201ENST00000332345 BANF1O75531 89 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 RASSF9O75901 435 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 SLCO2B1O94956 709 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 RPN2P04844 631 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 HGFP14210 728 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 PKMP14618 531 aaKnown RBP13.64□□□□□ -0.23
LIMS1-201ENST00000332345 MAPK10P53779 464 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 PCBP4P57723 403 aaKnown RBP13.64□□□□□ -0.23
LIMS1-201ENST00000332345 CAV1Q03135 178 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 PDIA2Q13087 525 aaKnown RBP13.64□□□□□ -0.23
LIMS1-201ENST00000332345 PRKAA1Q13131 559 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 CBLBQ13191 982 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 PRKG2Q13237 762 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 HP1BP3Q5SSJ5 553 aaPredicted RBP13.64□□□□□ -0.23
LIMS1-201ENST00000332345 PLEKHS1Q5SXH7 462 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 IRGCQ6NXR0 463 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 LRRC69Q6ZNQ3 347 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 CLEC14AQ86T13 490 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 IGDCC3Q8IVU1 814 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 DENND6AQ8IWF6 608 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 SLC22A15Q8IZD6 547 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 OR5K2Q8NHB8 316 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 SNIP1Q8TAD8 396 aaKnown RBP13.64□□□□□ -0.23
LIMS1-201ENST00000332345 JPH3Q8WXH2 748 aaPredicted RBP13.64□□□□□ -0.23
LIMS1-201ENST00000332345 RSC1A1Q92681 617 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 PWWP2AQ96N64 755 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 TAAR9Q96RI9 348 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 SRMSQ9H3Y6 488 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 PPANQ9NQ55 473 aaKnown RBP13.64□□□□□ -0.23
LIMS1-201ENST00000332345 LATS2Q9NRM7 1088 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 IARS2Q9NSE4 1012 aaKnown RBP13.64□□□□□ -0.23
LIMS1-201ENST00000332345 FBXO5Q9UKT4 447 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 RAXQ9Y2V3 346 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 COMMD10Q9Y6G5 202 aa13.64□□□□□ -0.23
LIMS1-201ENST00000332345 PMS2P1A4D2B8 440 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 OR5K3A6NET4 321 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 EFCAB7A8K855 629 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 B4E171 279 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 MATN2O00339 956 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 TP73O15350 636 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 TLX3O43711 291 aaPredicted RBP13.63□□□□□ -0.23
LIMS1-201ENST00000332345 ANKRD34CP0C6C1 535 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 ERVK-10P10266 1014 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 FGF3P11487 239 aaPredicted RBP13.63□□□□□ -0.23
LIMS1-201ENST00000332345 CCL4P13236 92 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 ITIH1P19827 911 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 SLC5A2P31639 672 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 TSPAN7P41732 249 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 SLC1A2P43004 574 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 GFERP55789 205 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 ABRQ12979 859 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms