RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 LPOP22079 712 aaPredicted RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 IDH3AP50213 366 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 INTS5Q6P9B9 1019 aaKnown RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 FBXO15Q8NCQ5 510 aaPredicted RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 ZYG11BQ9C0D3 744 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 CCDC86Q9H6F5 360 aaKnown RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 TMX2Q9Y320 296 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 NCOA3Q9Y6Q9 1424 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 TRIM64A6NGJ6 449 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 AKR1A1P14550 325 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 LAPTM5Q13571 262 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 FAM182AQ5T1J6 154 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 TAPT1Q6NXT6 567 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 SPATC1Q76KD6 591 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 OTOP1Q7RTM1 612 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 ACMSDQ8TDX5 336 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 C12orf66Q96MD2 445 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 MKLN1Q9UL63 735 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 SORCS3Q9UPU3 1222 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 SLC27A6Q9Y2P4 619 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 L7N2F9 121 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 GATBO75879 557 aaKnown RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 CDRT1O95170 752 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 FABP3P05413 133 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 IL7RP16871 459 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 CTSOP43234 321 aaPredicted RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 VAMP2P63027 116 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 OLR1P78380 273 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 TSTQ16762 297 aaKnown RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 C12orf50Q8NA57 414 aaPredicted RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 OR5T1Q8NG75 326 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 NECTIN3Q9NQS3 549 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 NME6O75414 186 aaPredicted RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 PAGE1O75459 146 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 ERBB2P04626 1255 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 ZMYND11Q15326 602 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 GTPBP2Q9BX10 602 aaKnown RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 ZNF717Q9BY31 904 aaPredicted RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 ZNF536O15090 1300 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 SAP18O00422 153 aaKnown RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 OAZ2O95190 189 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 HDDC3Q8N4P3 179 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 DNERQ8NFT8 737 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 STON2Q8WXE9 905 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 RFT1Q96AA3 541 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 DCSTAMPQ9H295 470 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 FBXO5Q9UKT4 447 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 LRRIQ1Q96JM4 1722 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 ELOVL7A1L3X0 281 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 OR2AG2A6NM03 316 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 HOXC12P31275 282 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 ZNF460Q14592 562 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 NPTX1Q15818 432 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 RAB2BQ8WUD1 216 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 ZNF558Q96NG5 402 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 KCTD15Q96SI1 283 aaPredicted RBP7.79□□□□□ -1.16
CIITA-201ENST00000324288 A0A1W2PQH9 124 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 OR6C74A6NCV1 312 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 TULP3O75386 442 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 SMAD3P84022 425 aaKnown RBP7.79□□□□□ -1.16
CIITA-201ENST00000324288 HERC3Q15034 1050 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 ZNF410Q86VK4 478 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 OR4K2Q8NGD2 314 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 MCCC1Q96RQ3 725 aaPredicted RBP7.79□□□□□ -1.16
CIITA-201ENST00000324288 MYPNQ86TC9 1320 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 BMP6P22004 513 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 PPP1R8Q12972 351 aaKnown RBP7.79□□□□□ -1.16
CIITA-201ENST00000324288 TLR1Q15399 786 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 TMPRSS9Q7Z410 1059 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 PIGZQ86VD9 579 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 SEC14L1Q92503 715 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 IFT27Q9BW83 186 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 BRD7Q9NPI1 651 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 MTRRQ9UBK8 725 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 REREQ9P2R6 1566 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 GSTT2BP0CG30 244 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 MAP2K4P45985 399 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 MLLT6P55198 1093 aaPredicted RBP7.79□□□□□ -1.16
CIITA-201ENST00000324288 KIAA1161Q6NSJ0 714 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 CHST15Q7LFX5 561 aaPredicted RBP7.79□□□□□ -1.16
CIITA-201ENST00000324288 SLC9A9Q8IVB4 645 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 PGAM4Q8N0Y7 254 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 PHTF2Q8N3S3 785 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 INPP4AQ96PE3 977 aaPredicted RBP7.79□□□□□ -1.16
CIITA-201ENST00000324288 AP3S2P59780 193 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 PPP4CP60510 307 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 S100A12P80511 92 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 FMO1Q01740 532 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 PDE12Q6L8Q7 609 aaKnown RBP7.79□□□□□ -1.16
CIITA-201ENST00000324288 ZNF517Q6ZMY9 492 aaPredicted RBP7.79□□□□□ -1.16
CIITA-201ENST00000324288 BBS12Q6ZW61 710 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 CENPSQ8N2Z9 138 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 OXR1Q8N573 874 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 AADATQ8N5Z0 425 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 ZNF649Q9BS31 505 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 TTTY10Q9BZA0 68 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 B3GNT4Q9C0J1 378 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 PORCNQ9H237 461 aa7.79□□□□□ -1.16
CIITA-201ENST00000324288 AGO3Q9H9G7 860 aaKnown RBP7.79□□□□□ -1.16
CIITA-201ENST00000324288 ZNF226Q9NYT6 803 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms