RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 PHC1P78364 1004 aa17.58■□□□□ 0.41
PRKCB-202ENST00000321728 NRG1Q02297 640 aaPredicted RBP17.58■□□□□ 0.41
PRKCB-202ENST00000321728 SMN1Q16637 294 aaKnown RBP17.58■□□□□ 0.41
PRKCB-202ENST00000321728 AP5B1Q2VPB7 878 aa17.58■□□□□ 0.41
PRKCB-202ENST00000321728 HIPK1Q86Z02 1210 aa17.58■□□□□ 0.41
PRKCB-202ENST00000321728 CCDC103Q8IW40 242 aa17.58■□□□□ 0.41
PRKCB-202ENST00000321728 RAVER1Q8IY67 606 aaKnown RBP17.58■□□□□ 0.41
PRKCB-202ENST00000321728 MICU2Q8IYU8 434 aa17.58■□□□□ 0.41
PRKCB-202ENST00000321728 TMEM86AQ8N2M4 240 aa17.58■□□□□ 0.41
PRKCB-202ENST00000321728 GPR150Q8NGU9 434 aa17.58■□□□□ 0.41
PRKCB-202ENST00000321728 SLC13A3Q8WWT9 602 aa17.58■□□□□ 0.41
PRKCB-202ENST00000321728 EMID1Q96A84 441 aaPredicted RBP17.58■□□□□ 0.41
PRKCB-202ENST00000321728 DCSTAMPQ9H295 470 aa17.58■□□□□ 0.41
PRKCB-202ENST00000321728 TMEM45AQ9NWC5 275 aa17.58■□□□□ 0.41
PRKCB-202ENST00000321728 OSGIN1Q9UJX0 560 aa17.58■□□□□ 0.41
PRKCB-202ENST00000321728 NEUROG3Q9Y4Z2 214 aa17.58■□□□□ 0.41
PRKCB-202ENST00000321728 TTC3P53804 2025 aa17.58■□□□□ 0.4
PRKCB-202ENST00000321728 DYRK3O43781 588 aa17.58■□□□□ 0.4
PRKCB-202ENST00000321728 SPNP16150 400 aa17.58■□□□□ 0.4
PRKCB-202ENST00000321728 ERVPABLB-1P60509 514 aa17.58■□□□□ 0.4
PRKCB-202ENST00000321728 CDC42EP1Q00587 391 aa17.58■□□□□ 0.4
PRKCB-202ENST00000321728 PON2Q15165 354 aa17.58■□□□□ 0.4
PRKCB-202ENST00000321728 GCNT7Q6ZNI0 430 aa17.58■□□□□ 0.4
PRKCB-202ENST00000321728 TSPAN18Q96SJ8 248 aa17.58■□□□□ 0.4
PRKCB-202ENST00000321728 MROH8Q9H579 483 aa17.58■□□□□ 0.4
PRKCB-202ENST00000321728 EPS8L2Q9H6S3 715 aa17.58■□□□□ 0.4
PRKCB-202ENST00000321728 PARVBQ9HBI1 364 aa17.58■□□□□ 0.4
PRKCB-202ENST00000321728 NEK6Q9HC98 313 aa17.58■□□□□ 0.4
PRKCB-202ENST00000321728 ACOT13Q9NPJ3 140 aa17.58■□□□□ 0.4
PRKCB-202ENST00000321728 FAM20BO75063 409 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 SCELO95171 688 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 MMP3P08254 477 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 PGFP49763 221 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 CLCNKBP51801 687 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 TRAF3Q13114 568 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 MAPKAPK3Q16644 382 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 ZNF181Q2M3W8 571 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 RFTN2Q52LD8 501 aaPredicted RBP17.57■□□□□ 0.4
PRKCB-202ENST00000321728 SETMARQ53H47 684 aaPredicted RBP17.57■□□□□ 0.4
PRKCB-202ENST00000321728 LAIR1Q6GTX8 287 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 LETMD1Q6P1Q0 360 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 PRSS48Q7RTY5 328 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 PHACTR4Q8IZ21 702 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 FBLIM1Q8WUP2 373 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 ZBTB20Q9HC78 741 aaPredicted RBP17.57■□□□□ 0.4
PRKCB-202ENST00000321728 CSNK1G1Q9HCP0 422 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 SNAI1O95863 264 aaPredicted RBP17.57■□□□□ 0.4
PRKCB-202ENST00000321728 SERPINA1P01009 418 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 ITGAMP11215 1152 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 FCGRTP55899 365 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 PTGR1Q14914 329 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 PCBP1Q15365 356 aaKnown RBP eCLIP17.57■□□□□ 0.42e-7■■■■■ 34.6
PRKCB-202ENST00000321728 ZNF404Q494X3 552 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 RSBN1Q5VWQ0 802 aaPredicted RBP17.57■□□□□ 0.4
PRKCB-202ENST00000321728 DESI1Q6ICB0 168 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 VASH1Q7L8A9 365 aaPredicted RBP17.57■□□□□ 0.4
PRKCB-202ENST00000321728 TAS2R42Q7RTR8 314 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 GPSM1Q86YR5 675 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 FAM83FQ8NEG4 500 aaPredicted RBP17.57■□□□□ 0.4
PRKCB-202ENST00000321728 HASPINQ8TF76 798 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 PROX1Q92786 737 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 CDCA5Q96FF9 252 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 ZBTB18Q99592 522 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 MED16Q9Y2X0 877 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 GMPPBQ9Y5P6 360 aa17.57■□□□□ 0.4
PRKCB-202ENST00000321728 RRN3P2A6NIE6 340 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 SAGE2PA6NJ88 616 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 IFRD1O00458 451 aaPredicted RBP17.56■□□□□ 0.4
PRKCB-202ENST00000321728 E2F3O00716 465 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 NDUFS3O75489 264 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 LCKP06239 509 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 JUNDP17535 347 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 OGNP20774 298 aaKnown RBP17.56■□□□□ 0.4
PRKCB-202ENST00000321728 GTF2E2P29084 291 aaKnown RBP17.56■□□□□ 0.4
PRKCB-202ENST00000321728 AKT1P31749 480 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 ACVR1Q04771 509 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 EIF4EBP2Q13542 120 aaPredicted RBP17.56■□□□□ 0.4
PRKCB-202ENST00000321728 CLPPQ16740 277 aaPredicted RBP17.56■□□□□ 0.4
PRKCB-202ENST00000321728 PLEKHG6Q3KR16 790 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 FAM174BQ3ZCQ3 159 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 ZC3H12BQ5HYM0 836 aaKnown RBP17.56■□□□□ 0.4
PRKCB-202ENST00000321728 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.56■□□□□ 0.4
PRKCB-202ENST00000321728 ARTNQ5T4W7 220 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 CYP4Z1Q86W10 505 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 PGBD5Q8N414 524 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 ARRDC2Q8TBH0 407 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 SEMA3CQ99985 751 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 PAAF1Q9BRP4 392 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 C1QTNF3Q9BXJ4 246 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 ITM2CQ9NQX7 267 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 ABCC13Q9NSE7 274 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 IL37Q9NZH6 218 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 PKP3Q9Y446 797 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 LOC285095A0A1B0GVY8 99 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 ANKRD34BA5PLL1 514 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 CREG1O75629 220 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 SLC2A4P14672 509 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 PCSK1P29120 753 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 CASP3P42574 277 aa17.56■□□□□ 0.4
PRKCB-202ENST00000321728 HK3P52790 923 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms