RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 AGO3Q9H9G7 860 aaKnown RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 TFR2Q9UP52 801 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 PCDHB3Q9Y5E6 796 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 KCNK1O00180 336 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 DLGAP1O14490 977 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 RAB36O95755 333 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 SMSP52788 366 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 RPS7P62081 194 aaKnown RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 CLCQ05315 142 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 GCNT7Q6ZNI0 430 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 KRT77Q7Z794 578 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 COPS4Q9BT78 406 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 BTBD1Q9H0C5 482 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 ASB8Q9H765 288 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 CCM2LQ9NUG4 571 aaPredicted RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 PRELID1Q9Y255 219 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 NCKAP1Q9Y2A7 1128 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 PROM1O43490 865 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 AMHP03971 560 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 CLCN4P51793 760 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 ARPP19P56211 112 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 NFKB2Q00653 900 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 PROX2Q3B8N5 592 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 ANO7Q6IWH7 933 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 DNM1P34Q6PK57 102 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 PHYKPLQ8IUZ5 450 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 TIGD4Q8IY51 512 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 DENND6BQ8NEG7 585 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 SMG7Q92540 1137 aaKnown RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 KCNJ9Q92806 393 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 TPD52L3Q96J77 140 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 ZNF570Q96NI8 536 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 FNDC3AQ9Y2H6 1198 aaKnown RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 KLRG2A4D1S0 409 aaPredicted RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 KHDRBS3O75525 346 aaKnown RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 THPOP40225 353 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 AP5B1Q2VPB7 878 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 FUT11Q495W5 492 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 TSTD2Q5T7W7 516 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 BPIFB6Q8NFQ5 453 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 ERVK-5Q9HDB9 667 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 PRDM5Q9NQX1 630 aaPredicted RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 CMTM6Q9NX76 183 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 TAS2R14Q9NYV8 317 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 MOCS1Q9NZB8 636 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 NPC1O15118 1278 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 PRNPP04156 253 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 CBX3Q13185 183 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 PON3Q15166 354 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 FGD3Q5JSP0 725 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 MBLAC2Q68D91 279 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 TMEM17Q86X19 198 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 RC3H2Q9HBD1 1191 aaKnown RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 TRIM36Q9NQ86 728 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 RSL1D1O76021 490 aaKnown RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 HLA-DPB1P04440 258 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 PTPRAP18433 802 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 MRPS10P82664 201 aaKnown RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 GPR107Q5VW38 600 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 TSPYL5Q86VY4 417 aaPredicted RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 UBASH3BQ8TF42 649 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 RERGQ96A58 199 aaPredicted RBP8.69□□□□□ -1.02
COL6A5-202ENST00000312481 SEMA3CQ99985 751 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 SLC6A15Q9H2J7 730 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 LIPT1Q9Y234 373 aa8.69□□□□□ -1.02
COL6A5-202ENST00000312481 EIF1AYO14602 144 aaKnown RBP8.68□□□□□ -1.02
COL6A5-202ENST00000312481 EPHB6O15197 1021 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 SNNO75324 88 aaPredicted RBP8.68□□□□□ -1.02
COL6A5-202ENST00000312481 CCNB2O95067 398 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 TGM6O95932 706 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 AK1P00568 194 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 EIF1AXP47813 144 aaKnown RBP8.68□□□□□ -1.02
COL6A5-202ENST00000312481 MARCKSL1P49006 195 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 SLC25A11Q02978 314 aaKnown RBP8.68□□□□□ -1.02
COL6A5-202ENST00000312481 CYP4F3Q08477 520 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 LBX2Q6XYB7 198 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 CXorf40AQ8TE69 158 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 CBX4O00257 560 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 TAS2R40P59535 323 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 PHF12Q96QT6 1004 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.68□□□□□ -1.02
COL6A5-202ENST00000312481 SNX10Q9Y5X0 201 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 CACNA1DQ01668 2161 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 FPGTO14772 594 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 NOBOXO60393 691 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 UGT2B4P06133 528 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 ADH1AP07327 375 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 CHRNB2P17787 502 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 ARCN1P48444 511 aaKnown RBP8.68□□□□□ -1.02
COL6A5-202ENST00000312481 HLCSP50747 726 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 TAS2R41P59536 307 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 PPP3R1P63098 170 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 SGCGQ13326 291 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 CYP2R1Q6VVX0 501 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 ADCK2Q7Z695 626 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 ACER1Q8TDN7 264 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 LINGO1Q96FE5 620 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 FRMD6Q96NE9 622 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 SPON1Q9HCB6 807 aa8.68□□□□□ -1.02
COL6A5-202ENST00000312481 TRPC4Q9UBN4 977 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms