RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 ACSBG2Q5FVE4 666 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 IRGCQ6NXR0 463 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 TRIM73Q86UV7 250 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 HOOK3Q86VS8 718 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 FAM129CQ86XR2 697 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 FBXO39Q8N4B4 442 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.73□□□□□ -0.53
SCFD1-201ENST00000311943 OR52E1Q8NGJ3 308 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 PEX13Q92968 403 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 C9orf72Q96LT7 481 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 SLC46A1Q96NT5 459 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 POLR1BQ9H9Y6 1135 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 SPHK1Q9NYA1 384 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 KLHL20Q9Y2M5 609 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 TDRKHQ9Y2W6 561 aaKnown RBP11.73□□□□□ -0.53
SCFD1-201ENST00000311943 OR5K4A6NMS3 321 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 CXorf49A8MYA2 514 aaPredicted RBP11.72□□□□□ -0.53
SCFD1-201ENST00000311943 PLD2O14939 933 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 GPC4O75487 556 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 CTSBP07858 339 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 PVRP15151 417 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 PGAM1P18669 254 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 AOAHP28039 575 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 CCKBRP32239 447 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 BDKRB1P46663 353 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 TTPAP49638 278 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 GRB7Q14451 532 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 LONRF1Q17RB8 773 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 TMEM71Q6P5X7 295 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 ZNF572Q7Z3I7 529 aaPredicted RBP11.72□□□□□ -0.53
SCFD1-201ENST00000311943 TAX1BP1Q86VP1 789 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 ZBED8Q8IZ13 594 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 HNRNPLLQ8WVV9 542 aaKnown RBP11.72□□□□□ -0.53
SCFD1-201ENST00000311943 ART4Q93070 314 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 MAP3K3Q99759 626 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 PPANQ9NQ55 473 aaKnown RBP11.72□□□□□ -0.53
SCFD1-201ENST00000311943 ZC3H7BQ9UGR2 993 aaKnown RBP11.72□□□□□ -0.53
SCFD1-201ENST00000311943 FBXO5Q9UKT4 447 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 ACSL5Q9ULC5 683 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 ASF1AQ9Y294 204 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 ITPR1Q14643 2758 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 HCRTR1O43613 425 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 DUX1O43812 170 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 AP2A2O94973 939 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 AHSGP02765 367 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 CDK4P11802 303 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 CHRM3P20309 590 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 LAMB3Q13751 1172 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 THOC5Q13769 683 aaKnown RBP11.72□□□□□ -0.53
SCFD1-201ENST00000311943 SYTL3Q4VX76 610 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 PRAMEF17Q5VTA0 474 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 ANKS6Q68DC2 871 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 SYDE1Q6ZW31 735 aaPredicted RBP11.72□□□□□ -0.53
SCFD1-201ENST00000311943 PDZD3Q86UT5 571 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 CCDC25Q86WR0 208 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 KDF1Q8NAX2 398 aaPredicted RBP11.72□□□□□ -0.53
SCFD1-201ENST00000311943 OR4D9Q8NGE8 314 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 USP7Q93009 1102 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.72□□□□□ -0.532e-9■■■■■ 43.2
SCFD1-201ENST00000311943 CARD6Q9BX69 1037 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 NRSN2Q9GZP1 204 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 KIR3DX1Q9H7L2 352 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 SAYSD1Q9NPB0 183 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 HRASLS2Q9NWW9 162 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 ICKQ9UPZ9 632 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 B3GALT1Q9Y5Z6 326 aa11.72□□□□□ -0.53
SCFD1-201ENST00000311943 ATMQ13315 3056 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 CCDC187A0A096LP49 1063 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 LILRA5A6NI73 299 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 EFCAB7A8K855 629 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 BTN3A1O00481 513 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 NRP2O60462 931 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 RASSF9O75901 435 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 FTH1P02794 183 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 PEBP1P30086 187 aaKnown RBP11.71□□□□□ -0.53
SCFD1-201ENST00000311943 KPNA2P52292 529 aaKnown RBP11.71□□□□□ -0.53
SCFD1-201ENST00000311943 CDKN2DP55273 166 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 GPX6P59796 221 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 GUCY2DQ02846 1103 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 KRT33BQ14525 404 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 EFTUD2Q15029 972 aaKnown RBP eCLIP11.71□□□□□ -0.531e-6■■□□□ 14.4
SCFD1-201ENST00000311943 TEDDM1Q5T9Z0 273 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 MRNIPQ6NTE8 343 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 ARHGAP22Q7Z5H3 698 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 PCGF5Q86SE9 256 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 ZFAND4Q86XD8 727 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 PDIK1LQ8N165 341 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 HEXDCQ8WVB3 486 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 CERS2Q96G23 380 aa11.71□□□□□ -0.53
SCFD1-201ENST00000311943 KMT2BQ9UMN6 2715 aaPredicted RBP11.71□□□□□ -0.53
SCFD1-201ENST00000311943 SMG1Q96Q15 3661 aaKnown RBP11.71□□□□□ -0.54
SCFD1-201ENST00000311943 ADAMTS20P59510 1910 aa11.71□□□□□ -0.54
SCFD1-201ENST00000311943 PKD1L2Q7Z442 2459 aa11.71□□□□□ -0.54
SCFD1-201ENST00000311943 FAM187AA6NFU0 413 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 AP3B1O00203 1094 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 TIAF1O95411 115 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 PKMP14618 531 aaKnown RBP11.7□□□□□ -0.54
SCFD1-201ENST00000311943 ZNF28P17035 718 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 SLC5A2P31639 672 aa11.7□□□□□ -0.54
SCFD1-201ENST00000311943 CAPZBP47756 277 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms