RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 RFTN2Q52LD8 501 aaPredicted RBP10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 GPR141Q7Z602 305 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 CACTIN-AS1Q8N1I8 211 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 LRRN4CLQ8ND94 238 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 NEK7Q8TDX7 302 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 RNF31Q96EP0 1072 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 CASD1Q96PB1 797 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 MIPEPQ99797 713 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 CLN6Q9NWW5 311 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 AJAP1Q9UKB5 411 aaPredicted RBP10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 PCDHGA11Q9Y5H2 935 aa10.52□□□□□ -0.72
SYNPO2-201ENST00000307142 LINC00854A0A1B0GVQ3 168 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 A0A1W2PQU0 124 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 HAS3O00219 553 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 RGS20O76081 388 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 CYP11A1P05108 521 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 PTCRAQ6ISU1 281 aaPredicted RBP10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 FSTL4Q6MZW2 842 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 SLC36A4Q6YBV0 504 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 C14orf80Q86SX3 495 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 FAM13CQ8NE31 585 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 HDHD2Q9H0R4 259 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 IL21RQ9HBE5 538 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 PTGES3LE9PB15 166 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 H3BQF6 201 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 SEMA4FO95754 770 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 MPIP34949 423 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 KIR3DL1P43629 444 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 GJA8P48165 433 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 MRPS22P82650 360 aaKnown RBP10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 BST1Q10588 318 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 CST6Q15828 149 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 TRMT5Q32P41 509 aaKnown RBP10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 RALGPS1Q5JS13 557 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 FAM43BQ6ZT52 329 aaPredicted RBP10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 TRIM74Q86UV6 250 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 TFGQ92734 400 aaPredicted RBP10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 RAB7BQ96AH8 199 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 RGMAQ96B86 450 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 ZHX1-C8orf76Q96EF9 292 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 SERHL2Q9H4I8 314 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 SLC40A1Q9NP59 571 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 SERHLQ9NQF3 203 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 PDE4DIPQ5VU43 2346 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 IL1R2P27930 398 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 RYKP34925 604 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 POLR2JP52435 117 aaKnown RBP10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 SLBPQ14493 270 aaKnown RBP eCLIP10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 GCNT6Q5T4J0 391 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 ZYG11AQ6WRX3 759 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 KIAA0408Q6ZU52 694 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 SETD9Q8NE22 299 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 SLC44A1Q8WWI5 657 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 RIT1Q92963 219 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 C9orf16Q9BUW7 83 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 EIF2B3Q9NR50 452 aaKnown RBP10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 A0A0J9YYE9 177 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 DUX1O43812 170 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 NBNO60934 754 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 FKBP6O75344 327 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 IFNGP01579 166 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 COX4I1P13073 169 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 PXNP49023 591 aaPredicted RBP10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 INAQ16352 499 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 TAS1R3Q7RTX0 852 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 PYCR2Q96C36 320 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 RMND5BQ96G75 393 aaPredicted RBP10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 RNF121Q9H920 327 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 SIX2Q9NPC8 291 aa10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 APOBEC3BQ9UH17 382 aaKnown RBP10.52□□□□□ -0.73
SYNPO2-201ENST00000307142 PRR5-ARHGAP8B1AHC4 643 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 TSPAN6O43657 245 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 BEST1O76090 585 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 INCA1Q0VD86 236 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 EPS8Q12929 822 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 TDHQ8IZJ6 230 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 TRMOQ9BU70 441 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 HRASLS2Q9NWW9 162 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 MEIS3P2A8K0S8 358 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 CRELD2Q6UXH1 353 aaPredicted RBP10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 RASGEF1CQ8N431 466 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 MAGEE2Q8TD90 523 aaPredicted RBP10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 NKD2Q969F2 451 aaPredicted RBP10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 ZNF641Q96N77 438 aaPredicted RBP10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 TBL1XR1Q9BZK7 514 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 TRPS1Q9UHF7 1281 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 DCLK1O15075 740 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 PDPK1O15530 556 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 ARSAP15289 507 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 HOXA11P31270 313 aaPredicted RBP10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 TOR1AIP1Q5JTV8 583 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 ARHGAP36Q6ZRI8 547 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 MPP5Q8N3R9 675 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 PGM2Q96G03 612 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 DDX28Q9NUL7 540 aaKnown RBP10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 KERAO60938 352 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 OR4F21O95013 312 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 CST1P01037 141 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 TNFRSF8P28908 595 aa10.51□□□□□ -0.73
SYNPO2-201ENST00000307142 HCAR3P49019 387 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms