RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 SIX3O95343 332 aaPredicted RBP12.46□□□□□ -0.41
USP38-201ENST00000307017 SLC6A9P48067 706 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 DGKQP52824 942 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 HMGCS1Q01581 520 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 GAD2Q05329 585 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 TAF10Q12962 218 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 SLC13A2Q13183 592 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 LIN52Q52LA3 116 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 PCSK9Q8NBP7 692 aaKnown RBP12.46□□□□□ -0.41
USP38-201ENST00000307017 CSPG4P5Q96PW8 444 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 PKP4Q99569 1192 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 SMPD3Q9NY59 655 aaPredicted RBP12.46□□□□□ -0.41
USP38-201ENST00000307017 PPM1HQ9ULR3 514 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 GABBR2O75899 941 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 CD36P16671 472 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 S100GP29377 79 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 PTPN9P43378 593 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 TSTQ16762 297 aaKnown RBP12.46□□□□□ -0.41
USP38-201ENST00000307017 RAB12Q6IQ22 244 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 LRRC55Q6ZSA7 311 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 COMTD1Q86VU5 262 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 PSD4Q8NDX1 1056 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 ZFP28Q8NHY6 868 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 KCNA7Q96RP8 456 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 ABCG4Q9H172 646 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 AJAP1Q9UKB5 411 aaPredicted RBP12.46□□□□□ -0.41
USP38-201ENST00000307017 CHD1O14646 1710 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 I3L521 148 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 PDPK1O15530 556 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 CDK18Q07002 472 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 C9orf57Q5W0N0 161 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 FAM105AQ9NUU6 356 aa12.46□□□□□ -0.41
USP38-201ENST00000307017 SPIN1Q9Y657 262 aaPredicted RBP12.46□□□□□ -0.41
USP38-201ENST00000307017 CXCR6O00574 342 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 HCRTO43612 131 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 GADD45GO95257 159 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 GDI2P50395 445 aaKnown RBP12.46□□□□□ -0.42
USP38-201ENST00000307017 MRPS6P82932 125 aaKnown RBP12.46□□□□□ -0.42
USP38-201ENST00000307017 TIGD6Q17RP2 521 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 C11orf65Q8NCR3 313 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 DNERQ8NFT8 737 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 CYB5D2Q8WUJ1 264 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 OSBPL7Q9BZF2 842 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 OR14I1A6ND48 311 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 J3QLW9 94 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 WWP2O00308 870 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 FGF10O15520 208 aaPredicted RBP12.46□□□□□ -0.42
USP38-201ENST00000307017 OR1I1O60431 355 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 TM7SF2O76062 418 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 PRAMEF1O95521 474 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 ZNF19P17023 458 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 OR12D2P58182 307 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 RAB2AP61019 212 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 DSG2Q14126 1118 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 PHTF2Q8N3S3 785 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 ARRDC4Q8NCT1 418 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 OR5J2Q8NH18 312 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 MFSD14AQ96MC6 490 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 RBCK1Q9BYM8 510 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 DPP7Q9UHL4 492 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 GMEB1Q9Y692 573 aa12.46□□□□□ -0.42
USP38-201ENST00000307017 TCAF2A6NFQ2 919 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 SLC30A4O14863 429 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 PSMD10O75832 226 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 TOXO94900 526 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 IFNGP01579 166 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 TKTP29401 623 aaKnown RBP12.45□□□□□ -0.42
USP38-201ENST00000307017 MAPK12P53778 367 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 SLC18A2Q05940 514 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 TRIM28Q13263 835 aaKnown RBP12.45□□□□□ -0.42
USP38-201ENST00000307017 DPYSQ14117 519 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 NFE2L1Q14494 772 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 NADK2Q4G0N4 442 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 MON1BQ7L1V2 547 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 CD300LFQ8TDQ1 290 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 MSLNLQ96KJ4 702 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 TMEM74Q96NL1 305 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 SPATA5L1Q9BVQ7 753 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 DPEP2Q9H4A9 486 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 CENPMQ9NSP4 180 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 POLR3BQ9NW08 1133 aaPredicted RBP12.45□□□□□ -0.42
USP38-201ENST00000307017 ADAM28Q9UKQ2 775 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 SAMD4AQ9UPU9 718 aaKnown RBP12.45□□□□□ -0.42
USP38-201ENST00000307017 DNMT3AQ9Y6K1 912 aaPredicted RBP12.45□□□□□ -0.42
USP38-201ENST00000307017 FADS2P1A8MWK0 482 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 XPNPEP2O43895 674 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 CD247P20963 164 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 PSMA1P25786 263 aaKnown RBP12.45□□□□□ -0.42
USP38-201ENST00000307017 GRPRP30550 384 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 MASP1P48740 699 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 RPIAP49247 311 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 CDKN1CP49918 316 aaPredicted RBP12.45□□□□□ -0.42
USP38-201ENST00000307017 SEMA3AQ14563 771 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 PTPRCAPQ14761 206 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 METTL21CQ5VZV1 264 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 XRRA1Q6P2D8 792 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 AAGABQ6PD74 315 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 OTOP2Q7RTS6 562 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 ZNF567Q8N184 647 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 APBB2Q92870 758 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms