RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 SORCS3Q9UPU3 1222 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 RPH3AQ9Y2J0 694 aaPredicted RBP12.18□□□□□ -0.46
ABCA3-201ENST00000301732 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
ABCA3-201ENST00000301732 SLC2A2P11168 524 aaPredicted RBP12.18□□□□□ -0.46
ABCA3-201ENST00000301732 CD247P20963 164 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 CTNNB1P35222 781 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 CLK3P49761 638 aaKnown RBP12.18□□□□□ -0.46
ABCA3-201ENST00000301732 TAF10Q12962 218 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 BBS12Q6ZW61 710 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 C17orf64Q86WR6 236 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 XYLT1Q86Y38 959 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 GALNT6Q8NCL4 622 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 RAB26Q9ULW5 256 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 RIIAD1A6NNX1 92 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 PSMD10O75832 226 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 MAPK12P53778 367 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 TSTQ16762 297 aaKnown RBP12.18□□□□□ -0.46
ABCA3-201ENST00000301732 ZBTB2Q8N680 514 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 BOLLQ8N9W6 283 aaKnown RBP12.18□□□□□ -0.46
ABCA3-201ENST00000301732 PCSK9Q8NBP7 692 aaKnown RBP12.18□□□□□ -0.46
ABCA3-201ENST00000301732 CASTOR1Q8WTX7 329 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 ZNF639Q9UID6 485 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 ZNF99A8MXY4 864 aaPredicted RBP12.18□□□□□ -0.46
ABCA3-201ENST00000301732 FSCN2O14926 492 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 CCNB2O95067 398 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 CYP3A5P20815 502 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 VAMP1P23763 118 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 AFF1P51825 1210 aaKnown RBP12.18□□□□□ -0.46
ABCA3-201ENST00000301732 SMIM11AP58511 58 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 CHIT1Q13231 466 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 SPIN3Q5JUX0 258 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 BEND4Q6ZU67 534 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 NRSN1Q8IZ57 195 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 IQCKQ8N0W5 287 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 C11orf65Q8NCR3 313 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 TMEM74Q96NL1 305 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 HOPXQ9BPY8 73 aaPredicted RBP12.18□□□□□ -0.46
ABCA3-201ENST00000301732 GLOD4Q9HC38 313 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 DNMT3AQ9Y6K1 912 aaPredicted RBP12.18□□□□□ -0.46
ABCA3-201ENST00000301732 ZFP37Q9Y6Q3 630 aaPredicted RBP12.18□□□□□ -0.46
ABCA3-201ENST00000301732 CNTNAP1P78357 1384 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 BOLA2-SMG1P6H3BVE0 249 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 CDK14O94921 469 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 PRAMEF1O95521 474 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 TGFB1P01137 390 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 ABHD2P08910 425 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 SRCP12931 536 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 MATKP42679 507 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 ARPC4P59998 168 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 NFE2L1Q14494 772 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 ARL9Q6T311 187 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 FSTL5Q8N475 847 aaPredicted RBP12.18□□□□□ -0.46
ABCA3-201ENST00000301732 CCDC54Q8NEL0 328 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 S100PBPQ96BU1 408 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 HAVCR1Q96D42 359 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 PPP1R16AQ96I34 528 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 TSPAN18Q96SJ8 248 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 RHOJQ9H4E5 214 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 CORO2BQ9UQ03 480 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.18□□□□□ -0.46
ABCA3-201ENST00000301732 CHD1O14646 1710 aa12.18□□□□□ -0.46
ABCA3-201ENST00000301732 TSPAN1O60635 241 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 APOC1P02654 83 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 IFNW1P05000 195 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 GADD45AP24522 165 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 MASP1P48740 699 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 KCNC4Q03721 635 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 PIM3Q86V86 326 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 RBFAQ8N0V3 343 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 TCF7L1Q9HCS4 588 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 CCNB1IP1Q9NPC3 277 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 NECTIN3Q9NQS3 549 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 C14orf119Q9NWQ9 140 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 KANSL3Q9P2N6 904 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 CLUHO75153 1309 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 TRPM1Q7Z4N2 1603 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 UPK3BL1B0FP48 263 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 UPK3BL2E5RIL1 263 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 RNASEH2AO75792 299 aaKnown RBP12.17□□□□□ -0.46
ABCA3-201ENST00000301732 CABYRO75952 493 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 PLATP00750 562 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 RPLP0P05388 317 aaKnown RBP12.17□□□□□ -0.46
ABCA3-201ENST00000301732 CTSOP43234 321 aaPredicted RBP12.17□□□□□ -0.46
ABCA3-201ENST00000301732 NPTX1Q15818 432 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 PYHIN1Q6K0P9 492 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 ZPBP2Q6X784 338 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 CANT1Q8WVQ1 401 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 MSANTD3Q96H12 275 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 ASAH2Q9NR71 780 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 FKBPLQ9UIM3 349 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 PROM1O43490 865 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 TBX10O75333 385 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 SPATA31C1P0DKV0 1188 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 ZNF8P17098 575 aaPredicted RBP12.17□□□□□ -0.46
ABCA3-201ENST00000301732 XRCC1P18887 633 aaPredicted RBP12.17□□□□□ -0.46
ABCA3-201ENST00000301732 CXCR2P25025 360 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 CLTCL1P53675 1640 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 MLLT1Q03111 559 aaPredicted RBP12.17□□□□□ -0.46
ABCA3-201ENST00000301732 GAD2Q05329 585 aa12.17□□□□□ -0.46
ABCA3-201ENST00000301732 VGLL4Q14135 290 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms