RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 EMX2Q04743 252 aa12.38□□□□□ -0.43
TMEM200A-201ENST00000296978 IL10RBQ08334 325 aa12.38□□□□□ -0.43
TMEM200A-201ENST00000296978 TUSC3Q13454 348 aa12.38□□□□□ -0.43
TMEM200A-201ENST00000296978 NFE2Q16621 373 aaPredicted RBP12.38□□□□□ -0.43
TMEM200A-201ENST00000296978 RNF19BQ6ZMZ0 732 aa12.38□□□□□ -0.43
TMEM200A-201ENST00000296978 PIANPQ8IYJ0 282 aa12.38□□□□□ -0.43
TMEM200A-201ENST00000296978 OR13F1Q8NGS4 319 aa12.38□□□□□ -0.43
TMEM200A-201ENST00000296978 ADGRE3Q9BY15 652 aa12.38□□□□□ -0.43
TMEM200A-201ENST00000296978 CIPCQ9C0C6 399 aa12.38□□□□□ -0.43
TMEM200A-201ENST00000296978 DERL2Q9GZP9 239 aa12.38□□□□□ -0.43
TMEM200A-201ENST00000296978 MARCH7Q9H992 704 aa12.38□□□□□ -0.43
TMEM200A-201ENST00000296978 TLR8Q9NR97 1041 aaKnown RBP12.38□□□□□ -0.43
TMEM200A-201ENST00000296978 POLR3BQ9NW08 1133 aaPredicted RBP12.38□□□□□ -0.43
TMEM200A-201ENST00000296978 ZIM2Q9NZV7 527 aa12.38□□□□□ -0.43
TMEM200A-201ENST00000296978 ASB1Q9Y576 335 aa12.38□□□□□ -0.43
TMEM200A-201ENST00000296978 RAI2Q9Y5P3 530 aa12.38□□□□□ -0.43
TMEM200A-201ENST00000296978 DOCK1Q14185 1865 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 HTR3EA5X5Y0 456 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 UPK3BL1B0FP48 263 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 UPK3BL2E5RIL1 263 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 MUSKO15146 869 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 MYO1DO94832 1006 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 PGLSO95336 258 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 FSHRP23945 695 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 CRHBPP24387 322 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 NKX2-5P52952 324 aaPredicted RBP12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 TRAF3Q13114 568 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 PWP1Q13610 501 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 ABRAXAS2Q15018 415 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 ZNF598Q86UK7 904 aaKnown RBP12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 ZDHHC21Q8IVQ6 265 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 PGBD5Q8N414 524 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 TTC9BQ8N6N2 239 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 SETD9Q8NE22 299 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 RHEBL1Q8TAI7 183 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 REXO5Q96IC2 774 aaKnown RBP12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 ZNF347Q96SE7 839 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 NUSAP1Q9BXS6 441 aaKnown RBP12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 PRDM8Q9NQV8 689 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 OSER1Q9NX31 292 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 PDP1Q9P0J1 537 aaPredicted RBP12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 PCTPQ9UKL6 214 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 AGO1Q9UL18 857 aaKnown RBP12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 TRIP12Q14669 1992 aaPredicted RBP12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 MFN2O95140 757 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 KRT8P05787 483 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 OGNP20774 298 aaKnown RBP12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 HTR1BP28222 390 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 HPCAL1P37235 193 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 RHOAP61586 193 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 PDPRQ8NCN5 879 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 PSD4Q8NDX1 1056 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 SPPL2AQ8TCT8 520 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 ASB8Q9H765 288 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 TLR6Q9Y2C9 796 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 NT5C1B-RDH14C9J2C7 533 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 SLC1A7O00341 560 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 POU1F1P28069 291 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 IDUAP35475 653 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 GJA5P36382 358 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 GNPDA1P46926 289 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 CASP9P55211 416 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 TOP3AQ13472 1001 aaPredicted RBP12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 MADCAM1Q13477 382 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 TAF1CQ15572 869 aaPredicted RBP12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 CARNMT1Q8N4J0 409 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 NDNFQ8TB73 568 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 APOL4Q9BPW4 351 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 CCSER2Q9H7U1 834 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 FARSBQ9NSD9 589 aaKnown RBP12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 IKZF3Q9UKT9 509 aa12.37□□□□□ -0.43
TMEM200A-201ENST00000296978 ALPLP05186 524 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 COL6A1P12109 1028 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 SLC11A2P49281 568 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 COLEC12Q5KU26 742 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 RSBN1Q5VWQ0 802 aaPredicted RBP12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 ZFAND4Q86XD8 727 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 COLGALT2Q8IYK4 626 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 UMODL1-AS1Q8N2C9 162 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 TMEM132CQ8N3T6 1108 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 HDAC2Q92769 488 aaKnown RBP12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 SH3YL1Q96HL8 342 aaPredicted RBP12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 TUBA1CQ9BQE3 449 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 FAM126AQ9BYI3 521 aaPredicted RBP12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 NDEL1Q9GZM8 345 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 LRTM1Q9HBL6 345 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 TMEM98Q9Y2Y6 226 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 TNPO3Q9Y5L0 923 aaKnown RBP12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 RFXANKO14593 260 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 CAPN15O75808 1086 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 APOA1P02647 267 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 PGRP06401 933 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 NEK2P51955 445 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 RAPSNQ13702 412 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 CES5AQ6NT32 575 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 GOLGA7Q7Z5G4 137 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 ADAMTSL2Q86TH1 951 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 CCDC117Q8IWD4 279 aaPredicted RBP12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 SLC7A5P1Q8MH63 180 aa12.36□□□□□ -0.43
TMEM200A-201ENST00000296978 CHDHQ8NE62 594 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms