RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 RGS4P49798 205 aa17.41■□□□□ 0.38
CCDC78-201ENST00000293889 DMPKQ09013 629 aa17.41■□□□□ 0.38
CCDC78-201ENST00000293889 MPP2Q14168 576 aa17.41■□□□□ 0.38
CCDC78-201ENST00000293889 TCEA2Q15560 299 aa17.41■□□□□ 0.38
CCDC78-201ENST00000293889 FAM83EQ2M2I3 478 aa17.41■□□□□ 0.38
CCDC78-201ENST00000293889 METRNLQ641Q3 311 aa17.41■□□□□ 0.38
CCDC78-201ENST00000293889 CYB5D1Q6P9G0 228 aa17.41■□□□□ 0.38
CCDC78-201ENST00000293889 RGS9BPQ6ZS82 235 aa17.41■□□□□ 0.38
CCDC78-201ENST00000293889 PHACTR4Q8IZ21 702 aa17.41■□□□□ 0.38
CCDC78-201ENST00000293889 PDLIM5Q96HC4 596 aaKnown RBP17.41■□□□□ 0.38
CCDC78-201ENST00000293889 DERL2Q9GZP9 239 aa17.41■□□□□ 0.38
CCDC78-201ENST00000293889 C12orf65Q9H3J6 166 aaKnown RBP17.41■□□□□ 0.38
CCDC78-201ENST00000293889 KCNK9Q9NPC2 374 aa17.41■□□□□ 0.38
CCDC78-201ENST00000293889 IKZF3Q9UKT9 509 aa17.41■□□□□ 0.38
CCDC78-201ENST00000293889 KCNK6Q9Y257 313 aa17.41■□□□□ 0.38
CCDC78-201ENST00000293889 LRP4O75096 1905 aa17.41■□□□□ 0.38
CCDC78-201ENST00000293889 RIF1Q5UIP0 2472 aaKnown RBP17.41■□□□□ 0.38
CCDC78-201ENST00000293889 PCDH15Q96QU1 1955 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 PRR19A6NJB7 356 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 EIF3FO00303 357 aaPredicted RBP17.4■□□□□ 0.38
CCDC78-201ENST00000293889 ENO3P13929 434 aaPredicted RBP17.4■□□□□ 0.38
CCDC78-201ENST00000293889 CD1DP15813 335 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 VCLP18206 1134 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 GLRBP48167 497 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 CTBSQ01459 385 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 BNC1Q01954 994 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 RIPK1Q13546 671 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 AGAP9Q5VTM2 703 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 CYHR1Q6ZMK1 362 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 LCA5Q86VQ0 697 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 PARP9Q8IXQ6 854 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 CCL4L1Q8NHW4 92 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 GLMNQ92990 594 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 TSNARE1Q96NA8 513 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 PARD6AQ9NPB6 346 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 TRNAU1APQ9NX07 287 aaKnown RBP17.4■□□□□ 0.38
CCDC78-201ENST00000293889 TMEM216Q9P0N5 145 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 TMEM131Q92545 1883 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 ZNF292O60281 2723 aa17.4■□□□□ 0.38
CCDC78-201ENST00000293889 PRPF4O43172 522 aaKnown RBP eCLIP17.39■□□□□ 0.38
CCDC78-201ENST00000293889 ZBTB14O43829 449 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 KCNJ13O60928 360 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 GLRA3O75311 464 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 CSF2P04141 144 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 NME1P15531 152 aaKnown RBP17.39■□□□□ 0.38
CCDC78-201ENST00000293889 JUNDP17535 347 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 RPA3P35244 121 aaPredicted RBP17.39■□□□□ 0.38
CCDC78-201ENST00000293889 BLKP51451 505 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 GTF2A1P52655 376 aaPredicted RBP17.39■□□□□ 0.38
CCDC78-201ENST00000293889 PLOD1Q02809 727 aaPredicted RBP17.39■□□□□ 0.38
CCDC78-201ENST00000293889 SPEM2Q0P670 501 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 LRP8Q14114 963 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 KIF19Q2TAC6 998 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 PRAMEF14Q5SWL7 426 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 C16orf46Q6P387 395 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 SLC22A15Q8IZD6 547 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 TCP10LQ8TDR4 215 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 TACO1Q9BSH4 297 aaKnown RBP17.39■□□□□ 0.38
CCDC78-201ENST00000293889 OSGEPL1Q9H4B0 414 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 NMRAL1Q9HBL8 299 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 SLC17A7Q9P2U7 560 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 EMCNQ9ULC0 261 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 GRID1Q9ULK0 1009 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 PLLPQ9Y342 182 aa17.39■□□□□ 0.38
CCDC78-201ENST00000293889 TCP11X1B4DZS4 312 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 H3BM21 787 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 TFEBP19484 476 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 TGM1P22735 817 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 AK4P27144 223 aaPredicted RBP17.39■□□□□ 0.37
CCDC78-201ENST00000293889 HOXD12P35452 270 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 CTSKP43235 329 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 ATP6V0D1P61421 351 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 RPA4Q13156 261 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 ACAP2Q15057 778 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 TSNAXIP1Q2TAA8 658 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 N4BP2L1Q5TBK1 243 aaPredicted RBP17.39■□□□□ 0.37
CCDC78-201ENST00000293889 TCEAL6Q6IPX3 200 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 ISCA2Q86U28 154 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 NRROSQ86YC3 692 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 MYO1HQ8N1T3 1032 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 DENND1AQ8TEH3 1009 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 SKA2Q8WVK7 121 aaPredicted RBP17.39■□□□□ 0.37
CCDC78-201ENST00000293889 DYDC1Q8WWB3 177 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 TCEAL3Q969E4 200 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 PTERQ96BW5 349 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 IQCGQ9H095 443 aaKnown RBP17.39■□□□□ 0.37
CCDC78-201ENST00000293889 OR52A5Q9H2C5 316 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 APOBEC3BQ9UH17 382 aaKnown RBP17.39■□□□□ 0.37
CCDC78-201ENST00000293889 ACSL5Q9ULC5 683 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 ARL2BPQ9Y2Y0 163 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 SNX11Q9Y5W9 270 aa17.39■□□□□ 0.37
CCDC78-201ENST00000293889 FAM186AA6NE01 2351 aa17.38■□□□□ 0.37
CCDC78-201ENST00000293889 NPEPPSL1A6NEC2 478 aa17.38■□□□□ 0.37
CCDC78-201ENST00000293889 CDC7O00311 574 aa17.38■□□□□ 0.37
CCDC78-201ENST00000293889 BTN3A1O00481 513 aa17.38■□□□□ 0.37
CCDC78-201ENST00000293889 MPC1LP0DKB6 136 aa17.38■□□□□ 0.37
CCDC78-201ENST00000293889 DPP6P42658 865 aa17.38■□□□□ 0.37
CCDC78-201ENST00000293889 CLCNKAP51800 687 aa17.38■□□□□ 0.37
CCDC78-201ENST00000293889 MNAT1P51948 309 aa17.38■□□□□ 0.37
CCDC78-201ENST00000293889 ABRQ12979 859 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms