RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 XKR5Q6UX68 686 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 RBM23Q86U06 439 aaKnown RBP18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 ZSWIM9Q86XI8 627 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 FIBINQ8TAL6 211 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 MAGEE2Q8TD90 523 aaPredicted RBP18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 SP7Q8TDD2 431 aaPredicted RBP18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 TUBGCP3Q96CW5 907 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 MYO19Q96H55 970 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 KCTD14Q9BQ13 255 aaPredicted RBP18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 NOTCH4Q99466 2003 aa18.01■□□□□ 0.47
PDLIM3-201ENST00000284767 A0A1W2PP18 115 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 SOBPA7XYQ1 873 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 NEDD8-MDP1E9PL57 170 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 NDUFS3O75489 264 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 RHOBTB1O94844 696 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 PGLSO95336 258 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 ESRRBO95718 433 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 HGFP14210 728 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 RELAQ04206 551 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 BNIP3Q12983 259 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 OR4D1Q15615 310 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 NEDD8Q15843 81 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 PTPRNQ16849 979 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 ARMC12Q5T9G4 340 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 FAM109BQ6ICB4 259 aaPredicted RBP18■□□□□ 0.47
PDLIM3-201ENST00000284767 UBE2Q1Q7Z7E8 422 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 ST13P5Q8NFI4 369 aaPredicted RBP18■□□□□ 0.47
PDLIM3-201ENST00000284767 CHPT1Q8WUD6 406 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 ACDQ96AP0 544 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 GPR63Q9BZJ6 419 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 NAA50Q9GZZ1 169 aaKnown RBP18■□□□□ 0.47
PDLIM3-201ENST00000284767 KIAA1522Q9P206 1035 aaPredicted RBP18■□□□□ 0.47
PDLIM3-201ENST00000284767 IFT80Q9P2H3 777 aaPredicted RBP18■□□□□ 0.47
PDLIM3-201ENST00000284767 GIMAP2Q9UG22 337 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 PCDHGA4Q9Y5G9 962 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 ZFC3H1O60293 1989 aaKnown RBP18■□□□□ 0.47
PDLIM3-201ENST00000284767 FUOMA2VDF0 154 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 LRRC14BA6NHZ5 514 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 IQCF5A8MTL0 148 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 NIPSNAP2O75323 286 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 MTHFD1P11586 935 aaKnown RBP18■□□□□ 0.47
PDLIM3-201ENST00000284767 HOXB8P17481 243 aaPredicted RBP18■□□□□ 0.47
PDLIM3-201ENST00000284767 CHRM3P20309 590 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 EEFSECP57772 596 aaKnown RBP18■□□□□ 0.47
PDLIM3-201ENST00000284767 GRIK2Q13002 908 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 TUBA3CQ13748 450 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 NFYCQ13952 458 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 FUT11Q495W5 492 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 TRUB1Q8WWH5 349 aaKnown RBP18■□□□□ 0.47
PDLIM3-201ENST00000284767 TANKQ92844 425 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 C1orf50Q9BV19 199 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 POLG2Q9UHN1 485 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 PTGDR2Q9Y5Y4 395 aa18■□□□□ 0.47
PDLIM3-201ENST00000284767 OAS3Q9Y6K5 1087 aaKnown RBP18■□□□□ 0.47
PDLIM3-201ENST00000284767 TRANK1O15050 2925 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 SNAP29O95721 258 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 MAP4P27816 1152 aaKnown RBP17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 LIPEQ05469 1076 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 OGFOD2Q6N063 350 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 NANOGP8Q6NSW7 305 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 TAS2R42Q7RTR8 314 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 SPATA19Q7Z5L4 167 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 CENPSQ8N2Z9 138 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 VOPP1Q96AW1 172 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 GPR21Q99679 349 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 TUBB1Q9H4B7 451 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 GPR45Q9Y5Y3 372 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 MTCL1Q9Y4B5 1905 aaKnown RBP17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 SIX3O95343 332 aaPredicted RBP17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 SRCP12931 536 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 BMXP51813 675 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 FOXA1P55317 472 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 KCNK10P57789 538 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 YBX1P67809 324 aaKnown RBP17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 BCL2L1Q07817 233 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 GRAMD4Q6IC98 578 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 GRASPQ7Z6J2 395 aaPredicted RBP17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 RHEBL1Q8TAI7 183 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 BDH2Q9BUT1 245 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 IL17CQ9P0M4 197 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 TSR3Q9UJK0 312 aaKnown RBP17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 B3GNT3Q9Y2A9 372 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 ANKRD12Q6UB98 2062 aa17.99■□□□□ 0.47
PDLIM3-201ENST00000284767 UBXN8O00124 270 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 SEC14L2O76054 403 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 ALBP02768 609 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 BCAP31P51572 246 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 RCAN2Q14206 197 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 LRRC73Q5JTD7 316 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 CTSL3PQ5NE16 218 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 MPP7Q5T2T1 576 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 FAM151BQ6UXP7 276 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 SFRP1Q8N474 314 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 NAT16Q8N8M0 369 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 NRBF2Q96F24 287 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 POPDC3Q9HBV1 291 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 SLCO3A1Q9UIG8 710 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 C9JVG2 144 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 PPP6CO00743 305 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 EEDO75530 441 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms