RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SLC9A3R1O14745 358 aaPredicted RBP16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 SIX3O95343 332 aaPredicted RBP16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 SPATA31D3P0C874 917 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 SPATA31D4Q6ZUB0 917 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 C7orf43Q8WVR3 580 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 OR51F1A6NGY5 319 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 CENPBD1B2RD01 187 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 STX16O14662 325 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 SLC7A4O43246 635 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 IFNA7P01567 189 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 ZNF806P0C7X5 589 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 AMD1P17707 334 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 SLC15A1P46059 708 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 DAOAP59103 153 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 SULT2A1Q06520 285 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 ZNF517Q6ZMY9 492 aaPredicted RBP16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 PHC2Q8IXK0 858 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 CLEC4DQ8WXI8 215 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 AHCYL2Q96HN2 611 aaKnown RBP16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 FEM1CQ96JP0 617 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 FBXW11Q9UKB1 542 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 MAGEB17A8MXT2 336 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 SCN2BO60939 215 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 PGRP06401 933 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 TGFBR2P37173 567 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 SPAM1P38567 509 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 PBX3P40426 434 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 ZNF132P52740 706 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 DPYSL2Q16555 572 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 USP30Q70CQ3 517 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 NIPA2Q8N8Q9 360 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 NTPCRQ9BSD7 190 aaKnown RBP16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 HMX1Q9NP08 348 aaPredicted RBP16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 INTS10Q9NVR2 710 aaKnown RBP16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 MALT1Q9UDY8 824 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 TLL2Q9Y6L7 1015 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 GTPBP1O00178 669 aaKnown RBP16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 TREHO43280 583 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 GABRR2P28476 465 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 TMBIM6P55061 237 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 MAP2K5Q13163 448 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 HNRNPDQ14103 355 aaKnown RBP16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 SYT16Q17RD7 645 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 DUSP28Q4G0W2 176 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 ADGRG2Q8IZP9 1017 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 CMASQ8NFW8 434 aaPredicted RBP16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 SPPL2BQ8TCT7 592 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 OR2B2Q9GZK3 357 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 ANKHQ9HCJ1 492 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 SNTG1Q9NSN8 517 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 SOHLH2Q9NX45 425 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 CD84Q9UIB8 345 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 SHPRHQ149N8 1683 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 GSAPA4D1B5 854 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 LRRC14BA6NHZ5 514 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 C1QTNF3-AMACRE9PGA6 284 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 TPST2O60704 377 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 TM4SF1P30408 202 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 RGS1Q08116 209 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 KIAA0930Q6ICG6 404 aaPredicted RBP16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 SERPINA9Q86WD7 417 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 OR10G6Q8NH81 332 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 AP2M1Q96CW1 435 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 KIAA1522Q9P206 1035 aaPredicted RBP16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 DCCP43146 1447 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 ARPC4-TTLL3A0A0A6YYG9 625 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 CPSF4LA6NMK7 179 aaKnown RBP16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 ACSL4O60488 711 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 STBD1O95210 358 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 IFNGP01579 166 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 CD36P16671 472 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 RHDQ02161 417 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 KLRG1Q96E93 195 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 CDK15Q96Q40 435 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 ATPIF1Q9UII2 106 aa16.21■□□□□ 0.19
SH3RF1-201ENST00000284637 DENRO43583 198 aaKnown RBP16.21■□□□□ 0.18
SH3RF1-201ENST00000284637 MMP3P08254 477 aa16.21■□□□□ 0.18
SH3RF1-201ENST00000284637 CCR10P46092 362 aa16.21■□□□□ 0.18
SH3RF1-201ENST00000284637 DAG1Q14118 895 aa16.21■□□□□ 0.18
SH3RF1-201ENST00000284637 TLR1Q15399 786 aa16.21■□□□□ 0.18
SH3RF1-201ENST00000284637 RFTN2Q52LD8 501 aaPredicted RBP16.21■□□□□ 0.18
SH3RF1-201ENST00000284637 SLC51AQ86UW1 340 aa16.21■□□□□ 0.18
SH3RF1-201ENST00000284637 TRPM4Q8TD43 1214 aa16.21■□□□□ 0.18
SH3RF1-201ENST00000284637 IRGQQ8WZA9 623 aa16.21■□□□□ 0.18
SH3RF1-201ENST00000284637 RERGQ96A58 199 aaPredicted RBP16.21■□□□□ 0.18
SH3RF1-201ENST00000284637 LRRC3Q9BY71 257 aa16.21■□□□□ 0.18
SH3RF1-201ENST00000284637 TBC1D17Q9HA65 648 aa16.21■□□□□ 0.18
SH3RF1-201ENST00000284637 C1orf109Q9NX04 203 aa16.21■□□□□ 0.18
SH3RF1-201ENST00000284637 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 OXSR1O95747 527 aaPredicted RBP16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 RPS14P62263 151 aaKnown RBP16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 CYP4V2Q6ZWL3 525 aaPredicted RBP16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 BTN2A1Q7KYR7 527 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 DCSTAMPQ9H295 470 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 ENPP3O14638 875 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 CCNB2O95067 398 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 DLDP09622 509 aaKnown RBP16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 CDH1P12830 882 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 MNDAP41218 407 aa16.2■□□□□ 0.18
SH3RF1-201ENST00000284637 GLUD2P49448 558 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms