RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 SVOPLQ8N434 492 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 SLC44A3Q8N4M1 653 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 TMCO5AQ8N6Q1 288 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 ZMIZ2Q8NF64 920 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 PHF10Q8WUB8 498 aaKnown RBP10.17□□□□□ -0.78
UPF3B-201ENST00000276201 TWIST2Q8WVJ9 160 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 EDAQ92838 391 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 NXPE3Q969Y0 559 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 CEP295NLQ96MC4 621 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 ASB16Q96NS5 453 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 CCDC115Q96NT0 180 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 SMOQ99835 787 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 FICDQ9BVA6 458 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 C1QTNF3Q9BXJ4 246 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 MFSD1Q9H3U5 465 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 FBRSL1Q9HCM7 1045 aaKnown RBP10.17□□□□□ -0.78
UPF3B-201ENST00000276201 C11orf16Q9NQ32 467 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 THG1LQ9NWX6 298 aaKnown RBP10.17□□□□□ -0.78
UPF3B-201ENST00000276201 OSER1Q9NX31 292 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 EGFL7Q9UHF1 273 aa10.17□□□□□ -0.78
UPF3B-201ENST00000276201 TECTAO75443 2155 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 AREL1O15033 823 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 NARSO43776 548 aaKnown RBP10.16□□□□□ -0.78
UPF3B-201ENST00000276201 BEST1O76090 585 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 GSTT2P0CG29 244 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 GSTT2BP0CG30 244 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 RAP2AP10114 183 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 FUT4P22083 530 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 GNA12Q03113 381 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 VPS26BQ4G0F5 336 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 ZC3H12BQ5HYM0 836 aaKnown RBP10.16□□□□□ -0.78
UPF3B-201ENST00000276201 C6orf141Q5SZD1 244 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 GPR158Q5T848 1215 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 TIGD7Q6NT04 549 aaPredicted RBP10.16□□□□□ -0.78
UPF3B-201ENST00000276201 CLEC20AQ6ZU45 233 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 MFSD4AQ8N468 514 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 PEX13Q92968 403 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 MUS81Q96NY9 551 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 CHID1Q9BWS9 393 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 TTLL2Q9BWV7 592 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 ARMC7Q9H6L4 198 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 CYP4F12Q9HCS2 524 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 TRPV5Q9NQA5 729 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 SPATA7Q9P0W8 599 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 ERVK-11Q9UQG0 969 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 FIS1Q9Y3D6 152 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 DENND4CQ5VZ89 1909 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 FAM86C2PA6NEL3 165 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 M0QX08 132 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 ARNTLO00327 626 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 CLIC3O95833 236 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 CCDC159P0C7I6 412 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 PABPC1P11940 636 aaKnown RBP10.16□□□□□ -0.78
UPF3B-201ENST00000276201 ARSAP15289 507 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 FDXRP22570 491 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 HRH2P25021 359 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 EEF1DP29692 281 aaKnown RBP10.16□□□□□ -0.78
UPF3B-201ENST00000276201 PGGT1BP53609 377 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 SH3BP2P78314 561 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 AQP6Q13520 282 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 POU6F1Q14863 301 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 CTF1Q16619 201 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 PHKG1Q16816 387 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 ARHGAP15Q53QZ3 475 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 AFMIDQ63HM1 303 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 CLEC6AQ6EIG7 209 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 TANGO2Q6ICL3 276 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 CRTC3Q6UUV7 619 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 ARHGAP12Q8IWW6 846 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 UBALD2Q8IYN6 164 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 CADM3Q8N126 398 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 SPATA6LQ8N4H0 392 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 CHDHQ8NE62 594 aaPredicted RBP10.16□□□□□ -0.78
UPF3B-201ENST00000276201 SMARCD2Q92925 531 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 FUNDC2Q9BWH2 189 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 PLA2G2FQ9BZM2 168 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 ING2Q9H160 280 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 TFB2MQ9H5Q4 396 aaKnown RBP10.16□□□□□ -0.78
UPF3B-201ENST00000276201 SP140LQ9H930 580 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 TRPV4Q9HBA0 871 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 CSNK1G1Q9HCP0 422 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 UXTQ9UBK9 157 aaPredicted RBP10.16□□□□□ -0.78
UPF3B-201ENST00000276201 SLC2A6Q9UGQ3 507 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 DUSP12Q9UNI6 340 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 NEU3Q9UQ49 428 aa10.16□□□□□ -0.78
UPF3B-201ENST00000276201 FAM234BA2RU67 622 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 ISPDA4D126 451 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 ASPDHA6ND91 283 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 TNFRSF10BO14763 440 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 PIP5K1BO14986 540 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 FGF10O15520 208 aaPredicted RBP10.15□□□□□ -0.78
UPF3B-201ENST00000276201 ECI2O75521 394 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 LRIG2O94898 1065 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 PCMT1P22061 227 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 RYKP34925 604 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 VIPR2P41587 438 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 SERPINB10P48595 397 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 MAP3K7CLP57077 242 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 KCNK10P57789 538 aa10.15□□□□□ -0.78
UPF3B-201ENST00000276201 NFYCQ13952 458 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms