RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 SNRNP200O75643 2136 aaKnown RBP17.91■□□□□ 0.46
SDF4-201ENST00000263741 KLHL33A6NCF5 533 aa17.91■□□□□ 0.46
SDF4-201ENST00000263741 RHPN2P1A8MT19 583 aa17.91■□□□□ 0.46
SDF4-201ENST00000263741 H3BMM5 538 aa17.91■□□□□ 0.46
SDF4-201ENST00000263741 RFPL3O75679 317 aa17.91■□□□□ 0.46
SDF4-201ENST00000263741 FASLGP48023 281 aa17.91■□□□□ 0.46
SDF4-201ENST00000263741 ZNF460Q14592 562 aa17.91■□□□□ 0.46
SDF4-201ENST00000263741 TMED2Q15363 201 aa17.91■□□□□ 0.46
SDF4-201ENST00000263741 ACSBG2Q5FVE4 666 aa17.91■□□□□ 0.46
SDF4-201ENST00000263741 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.91■□□□□ 0.46
SDF4-201ENST00000263741 CAPRIN2Q6IMN6 1127 aaKnown RBP17.91■□□□□ 0.46
SDF4-201ENST00000263741 ZBTB2Q8N680 514 aa17.91■□□□□ 0.46
SDF4-201ENST00000263741 PHC3Q8NDX5 983 aa17.91■□□□□ 0.46
SDF4-201ENST00000263741 CFAP61Q8NHU2 1237 aa17.91■□□□□ 0.46
SDF4-201ENST00000263741 CD200R1Q8TD46 325 aa17.91■□□□□ 0.46
SDF4-201ENST00000263741 ASZ1Q8WWH4 475 aa17.91■□□□□ 0.46
SDF4-201ENST00000263741 VPS39Q96JC1 886 aa17.91■□□□□ 0.46
SDF4-201ENST00000263741 ELMO2Q96JJ3 720 aa17.91■□□□□ 0.46
SDF4-201ENST00000263741 NCKIPSDQ9NZQ3 722 aa17.91■□□□□ 0.46
SDF4-201ENST00000263741 CIDEBQ9UHD4 219 aa17.91■□□□□ 0.46
SDF4-201ENST00000263741 NUDT21O43809 227 aaKnown RBP17.9■□□□□ 0.46
SDF4-201ENST00000263741 GPC4O75487 556 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 VIPP01282 170 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 GSTM1P09488 218 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 SLC2A4P14672 509 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 ALDH4A1P30038 563 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 PHBP35232 272 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 DUSP3P51452 185 aaPredicted RBP17.9■□□□□ 0.46
SDF4-201ENST00000263741 OR1D5P58170 312 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 GSTM4Q03013 218 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 UAP1Q16222 522 aaPredicted RBP17.9■□□□□ 0.46
SDF4-201ENST00000263741 HECTD2Q5U5R9 776 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 GALNT7Q86SF2 657 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 SLC9B2Q86UD5 537 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 CPNE9Q8IYJ1 553 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 SLC22A15Q8IZD6 547 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 SKA2Q8WVK7 121 aaPredicted RBP17.9■□□□□ 0.46
SDF4-201ENST00000263741 KCNJ9Q92806 393 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 NAT6Q93015 286 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 MCMBPQ9BTE3 642 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 TBC1D10AQ9BXI6 508 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 EPB41L4BQ9H329 900 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 ACSS3Q9H6R3 686 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 TXNDC16Q9P2K2 825 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 CACNA1AO00555 2505 aa17.9■□□□□ 0.46
SDF4-201ENST00000263741 FAM95CA0A1B0GW59 222 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 KRT87PA6NCN2 255 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 OR5K4A6NMS3 321 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 RIPK2O43353 540 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 MAPK9P45984 424 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 RPA4Q13156 261 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 GPR18Q14330 331 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 NKAIN2Q5VXU1 208 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 RBBP8Q99708 897 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 HGH1Q9BTY7 390 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 RHOJQ9H4E5 214 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 CAB39LQ9H9S4 337 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 NFS1Q9Y697 457 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 IFRD1O00458 451 aaPredicted RBP17.89■□□□□ 0.45
SDF4-201ENST00000263741 VPS26AO75436 327 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 XRCC1P18887 633 aaPredicted RBP17.89■□□□□ 0.45
SDF4-201ENST00000263741 GP5P40197 560 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 PPM1FP49593 454 aaPredicted RBP17.89■□□□□ 0.45
SDF4-201ENST00000263741 ABRQ12979 859 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 AMZ1Q400G9 498 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 ZNF449Q6P9G9 518 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 CYS1Q717R9 158 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 ZNF438Q7Z4V0 828 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 SPRED1Q7Z699 444 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 C10orf67Q8IYJ2 551 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 OR5AR1Q8NGP9 310 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 TFGQ92734 400 aaPredicted RBP17.89■□□□□ 0.45
SDF4-201ENST00000263741 CPNE1Q99829 537 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 SLC40A1Q9NP59 571 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 EVA1BQ9NVM1 165 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 NSMCE4AQ9NXX6 385 aa17.89■□□□□ 0.45
SDF4-201ENST00000263741 TRMT6Q9UJA5 497 aaKnown RBP17.89■□□□□ 0.45
SDF4-201ENST00000263741 MTO1Q9Y2Z2 717 aaKnown RBP17.89■□□□□ 0.45
SDF4-201ENST00000263741 SLCO2B1O94956 709 aa17.88■□□□□ 0.45
SDF4-201ENST00000263741 RPLP0P05388 317 aaKnown RBP17.88■□□□□ 0.45
SDF4-201ENST00000263741 ACADLP28330 430 aa17.88■□□□□ 0.45
SDF4-201ENST00000263741 GNGT1P63211 74 aa17.88■□□□□ 0.45
SDF4-201ENST00000263741 CCL7P80098 99 aa17.88■□□□□ 0.45
SDF4-201ENST00000263741 PRKG2Q13237 762 aa17.88■□□□□ 0.45
SDF4-201ENST00000263741 MARCH9Q86YJ5 346 aa17.88■□□□□ 0.45
SDF4-201ENST00000263741 ZIM3Q96PE6 472 aa17.88■□□□□ 0.45
SDF4-201ENST00000263741 FERD3LQ96RJ6 166 aa17.88■□□□□ 0.45
SDF4-201ENST00000263741 SLC38A3Q99624 504 aa17.88■□□□□ 0.45
SDF4-201ENST00000263741 STN1Q9H668 368 aaKnown RBP17.88■□□□□ 0.45
SDF4-201ENST00000263741 RDH14Q9HBH5 336 aa17.88■□□□□ 0.45
SDF4-201ENST00000263741 POT1Q9NUX5 634 aa17.88■□□□□ 0.45
SDF4-201ENST00000263741 ATXN7L1Q9ULK2 861 aaPredicted RBP17.88■□□□□ 0.45
SDF4-201ENST00000263741 ASF1AQ9Y294 204 aa17.88■□□□□ 0.45
SDF4-201ENST00000263741 COMMD10Q9Y6G5 202 aa17.88■□□□□ 0.45
SDF4-201ENST00000263741 A0A1W2PQM1 296 aa17.87■□□□□ 0.45
SDF4-201ENST00000263741 FDXRP22570 491 aa17.87■□□□□ 0.45
SDF4-201ENST00000263741 GMPRP36959 345 aa17.87■□□□□ 0.45
SDF4-201ENST00000263741 TAS2R39P59534 338 aa17.87■□□□□ 0.45
SDF4-201ENST00000263741 BMPR2Q13873 1038 aa17.87■□□□□ 0.45
SDF4-201ENST00000263741 PLEKHS1Q5SXH7 462 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms