RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 NLGN4XQ8N0W4 816 aa20.11■□□□□ 0.81
RARA-201ENST00000254066 PAF1Q8N7H5 531 aa20.11■□□□□ 0.81
RARA-201ENST00000254066 FAM86B1Q8N7N1 296 aa20.11■□□□□ 0.81
RARA-201ENST00000254066 C2orf69Q8N8R5 385 aa20.11■□□□□ 0.81
RARA-201ENST00000254066 FBXO30Q8TB52 745 aa20.11■□□□□ 0.81
RARA-201ENST00000254066 TEX13BQ9BXU2 312 aa20.11■□□□□ 0.81
RARA-201ENST00000254066 MKRN2Q9H000 416 aaKnown RBP20.11■□□□□ 0.81
RARA-201ENST00000254066 TFB2MQ9H5Q4 396 aaKnown RBP20.11■□□□□ 0.81
RARA-201ENST00000254066 ZNF408Q9H9D4 720 aa20.11■□□□□ 0.81
RARA-201ENST00000254066 WDR6Q9NNW5 1121 aaKnown RBP20.11■□□□□ 0.81
RARA-201ENST00000254066 PAQR5Q9NXK6 330 aaPredicted RBP20.11■□□□□ 0.81
RARA-201ENST00000254066 RNF6Q9Y252 685 aa20.11■□□□□ 0.81
RARA-201ENST00000254066 GPSM3Q9Y4H4 160 aa20.11■□□□□ 0.81
RARA-201ENST00000254066 FAM20BO75063 409 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 UROSP10746 265 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 MTHFD2P13995 350 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 SLC15A1P46059 708 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 ADIGQ0VDE8 80 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 ZNF517Q6ZMY9 492 aaPredicted RBP20.1■□□□□ 0.81
RARA-201ENST00000254066 NOXA1Q86UR1 476 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 TSPYL5Q86VY4 417 aaPredicted RBP20.1■□□□□ 0.81
RARA-201ENST00000254066 RAB43Q86YS6 212 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 LINC00469Q8N7U9 141 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 ZNF548Q8NEK5 533 aaPredicted RBP20.1■□□□□ 0.81
RARA-201ENST00000254066 KCTD13Q8WZ19 329 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 PGAP3Q96FM1 320 aaPredicted RBP20.1■□□□□ 0.81
RARA-201ENST00000254066 B3GNT4Q9C0J1 378 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 ACOXLQ9NUZ1 547 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 POLR1CO15160 346 aaPredicted RBP20.1■□□□□ 0.81
RARA-201ENST00000254066 SIX3O95343 332 aaPredicted RBP20.1■□□□□ 0.81
RARA-201ENST00000254066 MT-CYBP00156 380 aaPredicted RBP20.1■□□□□ 0.81
RARA-201ENST00000254066 CDKN2DP55273 166 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 ATP6AP1LQ52LC2 224 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 DCAF15Q66K64 600 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 ANKRD34AQ69YU3 496 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 TMEM179BQ7Z7N9 219 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 CCDC190Q86UF4 302 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 FLCNQ8NFG4 579 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 GIMAP4Q9NUV9 329 aa20.1■□□□□ 0.81
RARA-201ENST00000254066 PGLSO95336 258 aa20.09■□□□□ 0.81
RARA-201ENST00000254066 RPLP0P05388 317 aaKnown RBP20.09■□□□□ 0.81
RARA-201ENST00000254066 CYP2A7P20853 494 aa20.09■□□□□ 0.81
RARA-201ENST00000254066 MAGP20916 626 aa20.09■□□□□ 0.81
RARA-201ENST00000254066 TGFBR1P36897 503 aa20.09■□□□□ 0.81
RARA-201ENST00000254066 MTPNP58546 118 aa20.09■□□□□ 0.81
RARA-201ENST00000254066 HSPA14Q0VDF9 509 aa20.09■□□□□ 0.81
RARA-201ENST00000254066 PFKFB4Q16877 469 aa20.09■□□□□ 0.81
RARA-201ENST00000254066 PROX2Q3B8N5 592 aa20.09■□□□□ 0.81
RARA-201ENST00000254066 CDONQ4KMG0 1287 aa20.09■□□□□ 0.81
RARA-201ENST00000254066 DPP9Q86TI2 863 aa20.09■□□□□ 0.81
RARA-201ENST00000254066 ZNF598Q86UK7 904 aaKnown RBP20.09■□□□□ 0.81
RARA-201ENST00000254066 FAM109AQ8N4B1 249 aa20.09■□□□□ 0.81
RARA-201ENST00000254066 MTMR14Q8NCE2 650 aa20.09■□□□□ 0.81
RARA-201ENST00000254066 PPM1MQ96MI6 270 aa20.09■□□□□ 0.81
RARA-201ENST00000254066 ARNT2Q9HBZ2 717 aa20.09■□□□□ 0.81
RARA-201ENST00000254066 ERVH48-1M5A8F1 160 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 FDXRP22570 491 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 FKBP1BP68106 108 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 TSPY1Q01534 308 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 TARDBPQ13148 414 aaKnown RBP eCLIP20.08■□□□□ 0.815e-7■■■■□ 26.4
RARA-201ENST00000254066 GBX1Q14549 363 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 MAD2L1BPQ15013 274 aaPredicted RBP20.08■□□□□ 0.81
RARA-201ENST00000254066 SYPL2Q5VXT5 272 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 ANKS6Q68DC2 871 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 LIX1LQ8IVB5 337 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 SLC38A6Q8IZM9 456 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 ABI1Q8IZP0 508 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 LSMEM1Q8N8F7 131 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 ATOH8Q96SQ7 321 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 PHOX2BQ99453 314 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 LPIN3Q9BQK8 851 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 FSD1LQ9BXM9 530 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 HEBP1Q9NRV9 189 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 FBXO10Q9UK96 956 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 GMPPBQ9Y5P6 360 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 LCTP09848 1927 aa20.08■□□□□ 0.81
RARA-201ENST00000254066 MYLKQ15746 1914 aa20.08■□□□□ 0.8
RARA-201ENST00000254066 SHOXO15266 292 aa20.08■□□□□ 0.8
RARA-201ENST00000254066 DBTP11182 482 aaKnown RBP20.08■□□□□ 0.8
RARA-201ENST00000254066 PRKACGP22612 351 aa20.08■□□□□ 0.8
RARA-201ENST00000254066 TIE1P35590 1138 aa20.08■□□□□ 0.8
RARA-201ENST00000254066 SUOXP51687 545 aa20.08■□□□□ 0.8
RARA-201ENST00000254066 TBCEQ15813 527 aaPredicted RBP20.08■□□□□ 0.8
RARA-201ENST00000254066 LRRC26Q2I0M4 334 aa20.08■□□□□ 0.8
RARA-201ENST00000254066 EFCAB12Q6NXP0 572 aa20.08■□□□□ 0.8
RARA-201ENST00000254066 MARVELD3Q96A59 401 aa20.08■□□□□ 0.8
RARA-201ENST00000254066 NSUN5Q96P11 429 aaKnown RBP20.08■□□□□ 0.8
RARA-201ENST00000254066 C1QTNF3Q9BXJ4 246 aa20.08■□□□□ 0.8
RARA-201ENST00000254066 MIR1-1HGQ9H1L0 117 aa20.08■□□□□ 0.8
RARA-201ENST00000254066 DCAF13Q9NV06 445 aaKnown RBP20.08■□□□□ 0.8
RARA-201ENST00000254066 NDRG4Q9ULP0 352 aaKnown RBP20.08■□□□□ 0.8
RARA-201ENST00000254066 TMCC3Q9ULS5 477 aa20.08■□□□□ 0.8
RARA-201ENST00000254066 PKP3Q9Y446 797 aa20.08■□□□□ 0.8
RARA-201ENST00000254066 CA12O43570 354 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 SEC22BO75396 215 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 S1PR4O95977 384 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 LCKP06239 509 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 OR3A3P47888 321 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 LAPTM5Q13571 262 aa20.07■□□□□ 0.8
RARA-201ENST00000254066 TMEM132BQ14DG7 1078 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms