RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 PPARGP37231 505 aaPredicted RBP22.33■■□□□ 1.17
LSM4-201ENST00000252816 TTPAP49638 278 aa22.33■■□□□ 1.17
LSM4-201ENST00000252816 FOXM1Q08050 763 aa22.33■■□□□ 1.17
LSM4-201ENST00000252816 PRKG2Q13237 762 aa22.33■■□□□ 1.17
LSM4-201ENST00000252816 DNTTIP2Q5QJE6 756 aaKnown RBP22.33■■□□□ 1.17
LSM4-201ENST00000252816 MANEAQ5SRI9 462 aa22.33■■□□□ 1.17
LSM4-201ENST00000252816 PAPD7Q5XG87 772 aaKnown RBP22.33■■□□□ 1.17
LSM4-201ENST00000252816 OR52E1Q8NGJ3 308 aa22.33■■□□□ 1.17
LSM4-201ENST00000252816 PPM1MQ96MI6 270 aa22.33■■□□□ 1.17
LSM4-201ENST00000252816 SERPINB12Q96P63 405 aa22.33■■□□□ 1.17
LSM4-201ENST00000252816 OR6C1Q96RD1 312 aa22.33■■□□□ 1.17
LSM4-201ENST00000252816 CD180Q99467 661 aa22.33■■□□□ 1.17
LSM4-201ENST00000252816 ZPBPQ9BS86 351 aa22.33■■□□□ 1.17
LSM4-201ENST00000252816 HGH1Q9BTY7 390 aa22.33■■□□□ 1.17
LSM4-201ENST00000252816 PILRAQ9UKJ1 303 aa22.33■■□□□ 1.17
LSM4-201ENST00000252816 SMG1Q96Q15 3661 aaKnown RBP22.33■■□□□ 1.16
LSM4-201ENST00000252816 TEX51A0A1B0GUA7 166 aa22.32■■□□□ 1.16
LSM4-201ENST00000252816 PRMT5O14744 637 aaPredicted RBP22.32■■□□□ 1.16
LSM4-201ENST00000252816 MLNP12872 115 aa22.32■■□□□ 1.16
LSM4-201ENST00000252816 KPNA2P52292 529 aaKnown RBP22.32■■□□□ 1.16
LSM4-201ENST00000252816 CSE1LP55060 971 aaKnown RBP22.32■■□□□ 1.16
LSM4-201ENST00000252816 SYTL3Q4VX76 610 aa22.32■■□□□ 1.16
LSM4-201ENST00000252816 KRT222Q8N1A0 295 aa22.32■■□□□ 1.16
LSM4-201ENST00000252816 AGGF1Q8N302 714 aaeCLIP22.32■■□□□ 1.16
LSM4-201ENST00000252816 NAT8LQ8N9F0 302 aa22.32■■□□□ 1.16
LSM4-201ENST00000252816 OR5AR1Q8NGP9 310 aa22.32■■□□□ 1.16
LSM4-201ENST00000252816 LCN9Q8WX39 176 aa22.32■■□□□ 1.16
LSM4-201ENST00000252816 UBXN4Q92575 508 aa22.32■■□□□ 1.16
LSM4-201ENST00000252816 RNF31Q96EP0 1072 aa22.32■■□□□ 1.16
LSM4-201ENST00000252816 SLC41A2Q96JW4 573 aa22.32■■□□□ 1.16
LSM4-201ENST00000252816 CAPZA3Q96KX2 299 aa22.32■■□□□ 1.16
LSM4-201ENST00000252816 CARD6Q9BX69 1037 aa22.32■■□□□ 1.16
LSM4-201ENST00000252816 P2RY12Q9H244 342 aa22.32■■□□□ 1.16
LSM4-201ENST00000252816 SRMSQ9H3Y6 488 aa22.32■■□□□ 1.16
LSM4-201ENST00000252816 TFB2MQ9H5Q4 396 aaKnown RBP22.32■■□□□ 1.16
LSM4-201ENST00000252816 XAB2Q9HCS7 855 aaKnown RBP22.32■■□□□ 1.16
LSM4-201ENST00000252816 TLCD2A6NGC4 264 aa22.31■■□□□ 1.16
LSM4-201ENST00000252816 BTN3A3O00478 584 aa22.31■■□□□ 1.16
LSM4-201ENST00000252816 FANCGO15287 622 aa22.31■■□□□ 1.16
LSM4-201ENST00000252816 RAD1O60671 282 aa22.31■■□□□ 1.16
LSM4-201ENST00000252816 KCNAB1Q14722 419 aa22.31■■□□□ 1.16
LSM4-201ENST00000252816 ARMC3Q5W041 872 aa22.31■■□□□ 1.16
LSM4-201ENST00000252816 KIAA0930Q6ICG6 404 aaPredicted RBP22.31■■□□□ 1.16
LSM4-201ENST00000252816 ARMC6Q6NXE6 501 aa22.31■■□□□ 1.16
LSM4-201ENST00000252816 CASC4Q6P4E1 433 aa22.31■■□□□ 1.16
LSM4-201ENST00000252816 FBXO38Q6PIJ6 1188 aa22.31■■□□□ 1.16
LSM4-201ENST00000252816 TIPARPQ7Z3E1 657 aaKnown RBP22.31■■□□□ 1.16
LSM4-201ENST00000252816 CREG2Q8IUH2 290 aa22.31■■□□□ 1.16
LSM4-201ENST00000252816 VRK3Q8IV63 474 aa22.31■■□□□ 1.16
LSM4-201ENST00000252816 UBL7Q96S82 380 aaPredicted RBP22.31■■□□□ 1.16
LSM4-201ENST00000252816 NAPGQ99747 312 aaPredicted RBP22.31■■□□□ 1.16
LSM4-201ENST00000252816 XKR8Q9H6D3 395 aa22.31■■□□□ 1.16
LSM4-201ENST00000252816 CDYLQ9Y232 598 aa22.31■■□□□ 1.16
LSM4-201ENST00000252816 ASF1AQ9Y294 204 aa22.31■■□□□ 1.16
LSM4-201ENST00000252816 TMEM184BQ9Y519 407 aaPredicted RBP22.31■■□□□ 1.16
LSM4-201ENST00000252816 UBA6A0AVT1 1052 aaPredicted RBP22.3■■□□□ 1.16
LSM4-201ENST00000252816 SDR42E2A6NKP2 422 aa22.3■■□□□ 1.16
LSM4-201ENST00000252816 F8W8V4 182 aa22.3■■□□□ 1.16
LSM4-201ENST00000252816 STK17BO94768 372 aa22.3■■□□□ 1.16
LSM4-201ENST00000252816 FOLR1P15328 257 aa22.3■■□□□ 1.16
LSM4-201ENST00000252816 MAGEA3P43357 314 aa22.3■■□□□ 1.16
LSM4-201ENST00000252816 ATP1A2P50993 1020 aa22.3■■□□□ 1.16
LSM4-201ENST00000252816 PLOD1Q02809 727 aaPredicted RBP22.3■■□□□ 1.16
LSM4-201ENST00000252816 PPP1R7Q15435 360 aa22.3■■□□□ 1.16
LSM4-201ENST00000252816 KIAA1614Q5VZ46 1190 aa22.3■■□□□ 1.16
LSM4-201ENST00000252816 CACNA2D3Q8IZS8 1091 aa22.3■■□□□ 1.16
LSM4-201ENST00000252816 OTUD6BQ8N6M0 293 aa22.3■■□□□ 1.16
LSM4-201ENST00000252816 ELMO2Q96JJ3 720 aa22.3■■□□□ 1.16
LSM4-201ENST00000252816 IL1RAPL1Q9NZN1 696 aa22.3■■□□□ 1.16
LSM4-201ENST00000252816 PCYOX1Q9UHG3 505 aa22.3■■□□□ 1.16
LSM4-201ENST00000252816 POMT2Q9UKY4 750 aa22.3■■□□□ 1.16
LSM4-201ENST00000252816 ICKQ9UPZ9 632 aa22.3■■□□□ 1.16
LSM4-201ENST00000252816 FAM237BA0A1B0GVD1 139 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 BTN3A1O00481 513 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 GPC4O75487 556 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 NDUFS3O75489 264 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 DLGAP3O95886 979 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 ZNF28P17035 718 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 AOAHP28039 575 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 PTGIRP43119 386 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 HSPA14Q0VDF9 509 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 PRKAA1Q13131 559 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 IL11RAQ14626 422 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 TYSND1Q2T9J0 566 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 ANKRD20A4Q4UJ75 823 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 RNASEH2BQ5TBB1 312 aaKnown RBP22.29■■□□□ 1.16
LSM4-201ENST00000252816 PTRHD1Q6GMV3 140 aaKnown RBP22.29■■□□□ 1.16
LSM4-201ENST00000252816 MRNIPQ6NTE8 343 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 PCSK4Q6UW60 755 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 AMIGO1Q86WK6 493 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 SLC22A15Q8IZD6 547 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 IL22RA1Q8N6P7 574 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 SIDT2Q8NBJ9 832 aaKnown RBP22.29■■□□□ 1.16
LSM4-201ENST00000252816 SLCO2A1Q92959 643 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 TSSK1BQ9BXA7 367 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 SAMD15Q9P1V8 674 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 SAR1BQ9Y6B6 198 aa22.29■■□□□ 1.16
LSM4-201ENST00000252816 GSAPA4D1B5 854 aa22.28■■□□□ 1.16
LSM4-201ENST00000252816 EBLN1P0CF75 366 aa22.28■■□□□ 1.16
LSM4-201ENST00000252816 TPBGLP0DKB5 382 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms