RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 SPIBQ01892 262 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 GOLGA7Q7Z5G4 137 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 SERINC5Q86VE9 423 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 ZNF513Q8N8E2 541 aaPredicted RBP13.47□□□□□ -0.25
NCLN-201ENST00000246117 CYB5D2Q8WUJ1 264 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 KIAA1191Q96A73 305 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 SGK2Q9HBY8 427 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 ITM2CQ9NQX7 267 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 CLCA2Q9UQC9 943 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 PRKAB1Q9Y478 270 aa13.47□□□□□ -0.25
NCLN-201ENST00000246117 ZNF487B1APH4 448 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 PRAMEF11O60813 436 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 ESR1P03372 595 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 ALDOCP09972 364 aaKnown RBP13.46□□□□□ -0.25
NCLN-201ENST00000246117 PABPC4LP0CB38 370 aaKnown RBP13.46□□□□□ -0.25
NCLN-201ENST00000246117 NFKB2Q00653 900 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 HMGN2P46Q86SG4 172 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 HID1Q8IV36 788 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 RELTQ969Z4 430 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 VPS35Q96QK1 796 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 MRPL9Q9BYD2 267 aaKnown RBP13.46□□□□□ -0.25
NCLN-201ENST00000246117 ADPRHL2Q9NX46 363 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 IFRD1O00458 451 aaPredicted RBP13.46□□□□□ -0.25
NCLN-201ENST00000246117 COCHO43405 550 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 SELPP16109 830 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 DDX5P17844 614 aaKnown RBP13.46□□□□□ -0.25
NCLN-201ENST00000246117 PTGER3P43115 390 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 MAPKAPK2P49137 400 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 RPS14P62263 151 aaKnown RBP13.46□□□□□ -0.25
NCLN-201ENST00000246117 ABRAXAS2Q15018 415 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 HERC3Q15034 1050 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 NODALQ96S42 347 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 CDK5RAP1Q96SZ6 601 aaKnown RBP13.46□□□□□ -0.25
NCLN-201ENST00000246117 ZIC5Q96T25 663 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 CMTM6Q9NX76 183 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 TOR4AQ9NXH8 423 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 ASF1AQ9Y294 204 aa13.46□□□□□ -0.25
NCLN-201ENST00000246117 ABCA3Q99758 1704 aa13.46□□□□□ -0.26
NCLN-201ENST00000246117 XYLBO75191 536 aa13.46□□□□□ -0.26
NCLN-201ENST00000246117 ASLP04424 464 aa13.46□□□□□ -0.26
NCLN-201ENST00000246117 OGNP20774 298 aaKnown RBP13.46□□□□□ -0.26
NCLN-201ENST00000246117 GRK3P35626 688 aa13.46□□□□□ -0.26
NCLN-201ENST00000246117 RFTN2Q52LD8 501 aaPredicted RBP13.46□□□□□ -0.26
NCLN-201ENST00000246117 PLPP4Q5VZY2 271 aa13.46□□□□□ -0.26
NCLN-201ENST00000246117 EMILIN2Q9BXX0 1053 aa13.46□□□□□ -0.26
NCLN-201ENST00000246117 RGS17Q9UGC6 210 aaPredicted RBP13.46□□□□□ -0.26
NCLN-201ENST00000246117 PDE10AQ9Y233 779 aa13.46□□□□□ -0.26
NCLN-201ENST00000246117 SMIM30A4D0T7 59 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 POLR2EP19388 210 aaKnown RBP13.45□□□□□ -0.26
NCLN-201ENST00000246117 MEF2AQ02078 507 aaPredicted RBP13.45□□□□□ -0.26
NCLN-201ENST00000246117 TUBB3Q13509 450 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 PRR23BQ6ZRT6 265 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 CFAP206Q8IYR0 622 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 RNF175Q8N4F7 328 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 PSD4Q8NDX1 1056 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 FUBP3Q96I24 572 aaKnown RBP eCLIP13.45□□□□□ -0.26
NCLN-201ENST00000246117 ZFYVE19Q96K21 471 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 MTG2Q9H4K7 406 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 MARCH7Q9H992 704 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 TMEM248Q9NWD8 314 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 ACTR3BQ9P1U1 418 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 LCHNA4D1U4 455 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 FBP2O00757 339 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 TFAP2AP05549 437 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 ANXA4P09525 319 aaPredicted RBP13.45□□□□□ -0.26
NCLN-201ENST00000246117 IFNA8P32881 189 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 SPAM1P38567 509 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 SEMA3AQ14563 771 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 GANABQ14697 944 aaKnown RBP13.45□□□□□ -0.26
NCLN-201ENST00000246117 PTCHD3Q3KNS1 767 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 FOXB2Q5VYV0 432 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 PGM2L1Q6PCE3 622 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 ZNF605Q86T29 641 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 SORCS1Q8WY21 1168 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 RHBGQ9H310 441 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 TOR3AQ9H497 397 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 CERS4Q9HA82 394 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 PSMD11O00231 422 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 ADAM12O43184 909 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 PGRP06401 933 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 SLC6A2P23975 617 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 VARSP26640 1264 aaKnown RBP13.45□□□□□ -0.26
NCLN-201ENST00000246117 PREPP48147 710 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 TRAF3Q13114 568 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 HKDC1Q2TB90 917 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 DGKKQ5KSL6 1271 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 TSPAN33Q86UF1 283 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 UMODL1-AS1Q8N2C9 162 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 DPH2Q9BQC3 489 aaPredicted RBP13.45□□□□□ -0.26
NCLN-201ENST00000246117 CHCHD6Q9BRQ6 235 aa13.45□□□□□ -0.26
NCLN-201ENST00000246117 FAM234BA2RU67 622 aa13.44□□□□□ -0.26
NCLN-201ENST00000246117 TBC1D3BA6NDS4 549 aa13.44□□□□□ -0.26
NCLN-201ENST00000246117 SLC28A1O00337 649 aa13.44□□□□□ -0.26
NCLN-201ENST00000246117 UBFD1O14562 309 aaKnown RBP13.44□□□□□ -0.26
NCLN-201ENST00000246117 PGLSO95336 258 aa13.44□□□□□ -0.26
NCLN-201ENST00000246117 DAG1Q14118 895 aa13.44□□□□□ -0.26
NCLN-201ENST00000246117 DENND5AQ6IQ26 1287 aa13.44□□□□□ -0.26
NCLN-201ENST00000246117 UGT2A3Q6UWM9 527 aa13.44□□□□□ -0.26
NCLN-201ENST00000246117 DEF8Q6ZN54 512 aa13.44□□□□□ -0.26
NCLN-201ENST00000246117 ITIH5Q86UX2 942 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms