RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 YOD1Q5VVQ6 348 aaPredicted RBP9.19□□□□□ -0.94
TGFB3-201ENST00000238682 IGDCC3Q8IVU1 814 aa9.19□□□□□ -0.94
TGFB3-201ENST00000238682 TRAM1L1Q8N609 369 aa9.19□□□□□ -0.94
TGFB3-201ENST00000238682 KDF1Q8NAX2 398 aaPredicted RBP9.19□□□□□ -0.94
TGFB3-201ENST00000238682 DENND6BQ8NEG7 585 aa9.19□□□□□ -0.94
TGFB3-201ENST00000238682 FBXO27Q8NI29 283 aa9.19□□□□□ -0.94
TGFB3-201ENST00000238682 PIGKQ92643 395 aa9.19□□□□□ -0.94
TGFB3-201ENST00000238682 TSPAN17Q96FV3 270 aa9.19□□□□□ -0.94
TGFB3-201ENST00000238682 CFAP36Q96G28 342 aa9.19□□□□□ -0.94
TGFB3-201ENST00000238682 MCMBPQ9BTE3 642 aa9.19□□□□□ -0.94
TGFB3-201ENST00000238682 PFDN4Q9NQP4 134 aa9.19□□□□□ -0.94
TGFB3-201ENST00000238682 HCN2Q9UL51 889 aa9.19□□□□□ -0.94
TGFB3-201ENST00000238682 SCN8AQ9UQD0 1980 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 LNP1A1A4G5 178 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 PIGNO95427 931 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 DNTTP04053 509 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 HOXC4P09017 264 aaPredicted RBP9.18□□□□□ -0.94
TGFB3-201ENST00000238682 GSTT2P0CG29 244 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 GSTT2BP0CG30 244 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 COL6A2P12110 1019 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 ADRB3P13945 408 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 ITGALP20701 1170 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 HNF1BP35680 557 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 SF3A3Q12874 501 aaKnown RBP eCLIP9.18□□□□□ -0.94
TGFB3-201ENST00000238682 TRAP1Q12931 704 aaKnown RBP9.18□□□□□ -0.94
TGFB3-201ENST00000238682 MPP2Q14168 576 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 GALNT3Q14435 633 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 POU6F1Q14863 301 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 EFTUD2Q15029 972 aaKnown RBP eCLIP9.18□□□□□ -0.94
TGFB3-201ENST00000238682 ST3GAL2Q16842 350 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 TEDDM1Q5T9Z0 273 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 SNX20Q7Z614 316 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 SLC25A41Q8N5S1 370 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 OR13J1Q8NGT2 312 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 OR4L1Q8NH43 312 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 SIPA1Q96FS4 1042 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 CDKN2AIPNLQ96HQ2 116 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 EXOC2Q96KP1 924 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 ZSCAN5AQ9BUG6 496 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 TSSK1BQ9BXA7 367 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 CHRAC1Q9NRG0 131 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 C20orf96Q9NUD7 363 aaPredicted RBP9.18□□□□□ -0.94
TGFB3-201ENST00000238682 ANKRD6Q9Y2G4 727 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 TSC22D4Q9Y3Q8 395 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 ACTL7AQ9Y615 435 aa9.18□□□□□ -0.94
TGFB3-201ENST00000238682 C10orf142B7Z368 130 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 RNGTTO60942 597 aaKnown RBP9.17□□□□□ -0.94
TGFB3-201ENST00000238682 USP12O75317 370 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 AP2A2O94973 939 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 MPOP05164 745 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 CTSLP07711 333 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 PDHA1P08559 390 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 SNRPAP09012 282 aaKnown RBP9.17□□□□□ -0.94
TGFB3-201ENST00000238682 ENGP17813 658 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 PTGER3P43115 390 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 NOVA1P51513 510 aaKnown RBP9.17□□□□□ -0.94
TGFB3-201ENST00000238682 FASTKD1Q53R41 847 aaKnown RBP9.17□□□□□ -0.94
TGFB3-201ENST00000238682 N4BP2L1Q5TBK1 243 aaPredicted RBP9.17□□□□□ -0.94
TGFB3-201ENST00000238682 CRTC1Q6UUV9 634 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 TMCO5AQ8N6Q1 288 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 CHST14Q8NCH0 376 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 BLOC1S5Q8TDH9 187 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 DCAKDQ8WVC6 231 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 COL26A1Q96A83 441 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 COQ10AQ96MF6 247 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 NSMCE3Q96MG7 304 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 LENG8Q96PV6 779 aaPredicted RBP9.17□□□□□ -0.94
TGFB3-201ENST00000238682 SPATA16Q9BXB7 569 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 NUF2Q9BZD4 464 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 TPSD1Q9BZJ3 242 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 RHOJQ9H4E5 214 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 PLAC1Q9HBJ0 212 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 CATSPERZQ9NTU4 200 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 IFT80Q9P2H3 777 aaPredicted RBP9.17□□□□□ -0.94
TGFB3-201ENST00000238682 APOBEC2Q9Y235 224 aaKnown RBP9.17□□□□□ -0.94
TGFB3-201ENST00000238682 LAMA2P24043 3122 aaKnown RBP9.17□□□□□ -0.94
TGFB3-201ENST00000238682 PLXNA2O75051 1894 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 ZDBF2Q9HCK1 2354 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 TRIM24O15164 1050 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 FLRT2O43155 660 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 PLRG1O43660 514 aaKnown RBP9.17□□□□□ -0.94
TGFB3-201ENST00000238682 ZNF254O75437 659 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 KRT15P19012 456 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 NMBRP28336 390 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 CHRNA4P43681 627 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 SPINT3P49223 89 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 KPNA2P52292 529 aaKnown RBP9.17□□□□□ -0.94
TGFB3-201ENST00000238682 BLVRAP53004 296 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 LIMK2P53671 638 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 B2MP61769 119 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 POU4F1Q01851 419 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 OVGP1Q12889 678 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 E2F2Q14209 437 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 INSCQ1MX18 579 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 TTC23LQ6PF05 361 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 PARS2Q7L3T8 475 aaKnown RBP9.17□□□□□ -0.94
TGFB3-201ENST00000238682 CPLX4Q7Z7G2 160 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 TRIM69Q86WT6 500 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 ATL1Q8WXF7 558 aa9.17□□□□□ -0.94
TGFB3-201ENST00000238682 SORCS1Q8WY21 1168 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms