RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 IFNA6P05013 189 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 ACTR3P61158 418 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 OLIG2Q13516 323 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 TAF1AQ15573 450 aaPredicted RBP13.18□□□□□ -0.3
NEK4-201ENST00000233027 CRTC2Q53ET0 693 aaPredicted RBP13.18□□□□□ -0.3
NEK4-201ENST00000233027 COLEC12Q5KU26 742 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 CERS6Q6ZMG9 384 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 OR10H5Q8NGA6 315 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 TBX5Q99593 518 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 KAT8Q9H7Z6 458 aaKnown RBP13.18□□□□□ -0.3
NEK4-201ENST00000233027 C1orf109Q9NX04 203 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 RWDD3Q9Y3V2 267 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 PEX16Q9Y5Y5 336 aa13.18□□□□□ -0.3
NEK4-201ENST00000233027 MTRF1O75570 445 aaKnown RBP13.17□□□□□ -0.3
NEK4-201ENST00000233027 SIX3O95343 332 aaPredicted RBP13.17□□□□□ -0.3
NEK4-201ENST00000233027 GLUD1P00367 558 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 GIMD1P0DJR0 217 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 LAMP2P13473 410 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 ELNP15502 786 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 FECHP22830 423 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 SOWAHAQ2M3V2 549 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 NCBP2-AS2Q69YL0 99 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 USP43Q70EL4 1123 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 PIGXQ8TBF5 258 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 BRSK1Q8TDC3 778 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 POF1BQ8WVV4 589 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 GAL3ST1Q99999 423 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 CHIAQ9BZP6 476 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 NECTIN3Q9NQS3 549 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 OXSMQ9NWU1 459 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 CKLFQ9UBR5 152 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 ZDHHC2Q9UIJ5 367 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 PRODHO43272 600 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 TRIM3O75382 744 aaPredicted RBP13.17□□□□□ -0.3
NEK4-201ENST00000233027 PBX3P40426 434 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 RFTN2Q52LD8 501 aaPredicted RBP13.17□□□□□ -0.3
NEK4-201ENST00000233027 SYPL2Q5VXT5 272 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 CHST15Q7LFX5 561 aaPredicted RBP13.17□□□□□ -0.3
NEK4-201ENST00000233027 GHDCQ8N2G8 530 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 MTERF1Q99551 399 aaKnown RBP13.17□□□□□ -0.3
NEK4-201ENST00000233027 CYP3A5P20815 502 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 TCEA1P23193 301 aaKnown RBP13.17□□□□□ -0.3
NEK4-201ENST00000233027 AKT2P31751 481 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 IFI44LQ53G44 452 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 GET4Q7L5D6 327 aaPredicted RBP13.17□□□□□ -0.3
NEK4-201ENST00000233027 SLC38A4Q969I6 547 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 ACBD6Q9BR61 282 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 AMBNQ9NP70 447 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 DNAJB9Q9UBS3 223 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 H3BNH8 94 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 PER2O15055 1255 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 MPZL2O60487 215 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 RYKP34925 604 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 HERVK_113P63132 956 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 FBXO42Q6P3S6 717 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 OR10H4Q8NGA5 316 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 ERVK-6Q9BXR3 956 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 FAM83DQ9H4H8 585 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 ELAC1Q9H777 363 aaKnown RBP13.17□□□□□ -0.3
NEK4-201ENST00000233027 XPNPEP1Q9NQW7 623 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 GIN1Q9NXP7 522 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 COMMD3Q9UBI1 195 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 OAZ3Q9UMX2 235 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 NID2Q14112 1375 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 FABP12A6NFH5 140 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 XKRYO14609 159 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 YBEYP58557 167 aaPredicted RBP13.17□□□□□ -0.3
NEK4-201ENST00000233027 IL10RBQ08334 325 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 LAPTM5Q13571 262 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 MYBPC3Q14896 1274 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 CHST4Q8NCG5 386 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 OR51V1Q9H2C8 321 aa13.17□□□□□ -0.3
NEK4-201ENST00000233027 NEURL4Q96JN8 1562 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 FAM234BA2RU67 622 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 SOWAHBA6NEL2 793 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 TCAF2A6NFQ2 919 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 HLA-DQB2P05538 268 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 PSKH1P11801 424 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 SP3Q02447 781 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 TARDBPQ13148 414 aaKnown RBP eCLIP13.16□□□□□ -0.3
NEK4-201ENST00000233027 TMEM220Q6QAJ8 160 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 CANT1Q8WVQ1 401 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 UPF1Q92900 1129 aaKnown RBP eCLIP13.16□□□□□ -0.3
NEK4-201ENST00000233027 ARMC5Q96C12 935 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 AKTIPQ9H8T0 292 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 CNTN3Q9P232 1028 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 FETUBQ9UGM5 382 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 PCDHA2Q9Y5H9 948 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 SMPD1P17405 629 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 RPL17P18621 184 aaKnown RBP13.16□□□□□ -0.3
NEK4-201ENST00000233027 SLC7A1P30825 629 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 HTR7P34969 479 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 CEBPGP53567 150 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 GPX6P59796 221 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 DPYSL2Q16555 572 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 TNFAIP8L2Q6P589 184 aaPredicted RBP13.16□□□□□ -0.3
NEK4-201ENST00000233027 RAB2BQ8WUD1 216 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 PIK3R3Q92569 461 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 C5orf34Q96MH7 638 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 NEK6Q9HC98 313 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms