RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 KCNH1O95259 989 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 C1QCP02747 245 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 FCGR1AP12314 374 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 POLR2IP36954 125 aaKnown RBP14.35□□□□□ -0.11
CNOT3-201ENST00000221232 RGS4P49798 205 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 CHRNB3Q05901 458 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 HSPA14Q0VDF9 509 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 PCBP2Q15366 365 aaKnown RBP eCLIP14.35□□□□□ -0.117e-7■■■■□ 21.9
CNOT3-201ENST00000221232 NKG7Q16617 165 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 TMEM150AQ86TG1 271 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 PACRGLQ8N7B6 248 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 OR2T12Q8NG77 320 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 C2orf15Q8WU43 125 aaKnown RBP14.35□□□□□ -0.11
CNOT3-201ENST00000221232 TSPEARQ8WU66 669 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 MAGEE1Q9HCI5 957 aa14.35□□□□□ -0.11
CNOT3-201ENST00000221232 PTBP2Q9UKA9 531 aaKnown RBP14.35□□□□□ -0.11
CNOT3-201ENST00000221232 GLYATL1P3A0A0U1RQE8 302 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 TYW5A2RUC4 315 aaKnown RBP14.34□□□□□ -0.11
CNOT3-201ENST00000221232 ANKRD28O15084 1053 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 ATE1O95260 518 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 ANXA6P08133 673 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 ITGALP20701 1170 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 NR4A1P22736 598 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 SHMT2P34897 504 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 HPCAP84074 193 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 BFSP2Q13515 415 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 PWP1Q13610 501 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 LAPTM4AQ15012 233 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 BORAQ6PGQ7 559 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 SUSD1Q6UWL2 747 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 PROSER1Q86XN7 944 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 RBFAQ8N0V3 343 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 C10orf111Q8N326 155 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 ZBTB2Q8N680 514 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 SLC13A3Q8WWT9 602 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 GAB3Q8WWW8 586 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 ISG20Q96AZ6 181 aaKnown RBP14.34□□□□□ -0.11
CNOT3-201ENST00000221232 IGSF21Q96ID5 467 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 TSSK3Q96PN8 268 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 BEGAINQ9BUH8 593 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 ING2Q9H160 280 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 H7C0S8 307 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 BMP10O95393 424 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 CKMP06732 381 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 COL6A1P12109 1028 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 GRIK2Q13002 908 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 VEPH1Q14D04 833 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 DGKKQ5KSL6 1271 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 ERI1Q8IV48 349 aaKnown RBP14.34□□□□□ -0.11
CNOT3-201ENST00000221232 GPR26Q8NDV2 337 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 ADAMTS19Q8TE59 1207 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 FAM162AQ96A26 154 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 HSPBAP1Q96EW2 488 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 ASIC4Q96FT7 647 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 OR52E6Q96RD3 313 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 ZBTB18Q99592 522 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 CD244Q9BZW8 370 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 CWH43Q9H720 699 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 HEBP1Q9NRV9 189 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 RHBDL2Q9NX52 303 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 GNPTGQ9UJJ9 305 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 EIF3LQ9Y262 564 aaKnown RBP14.34□□□□□ -0.11
CNOT3-201ENST00000221232 PCDHGA11Q9Y5H2 935 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 OR51B4Q9Y5P0 310 aa14.34□□□□□ -0.11
CNOT3-201ENST00000221232 MYCLP1P12525 358 aaPredicted RBP14.33□□□□□ -0.11
CNOT3-201ENST00000221232 IL7RP16871 459 aa14.33□□□□□ -0.11
CNOT3-201ENST00000221232 DGKAP23743 735 aa14.33□□□□□ -0.11
CNOT3-201ENST00000221232 CD70P32970 193 aa14.33□□□□□ -0.11
CNOT3-201ENST00000221232 ENTPD1P49961 510 aa14.33□□□□□ -0.11
CNOT3-201ENST00000221232 TPD52P55327 224 aaPredicted RBP14.33□□□□□ -0.11
CNOT3-201ENST00000221232 IL1RL1Q01638 556 aa14.33□□□□□ -0.11
CNOT3-201ENST00000221232 RAB39AQ14964 217 aa14.33□□□□□ -0.11
CNOT3-201ENST00000221232 PGS1Q32NB8 556 aa14.33□□□□□ -0.11
CNOT3-201ENST00000221232 FAM98BQ52LJ0 330 aaKnown RBP14.33□□□□□ -0.11
CNOT3-201ENST00000221232 OSCP1Q8WVF1 389 aa14.33□□□□□ -0.11
CNOT3-201ENST00000221232 ITCHQ96J02 903 aa14.33□□□□□ -0.11
CNOT3-201ENST00000221232 MRPL9Q9BYD2 267 aaKnown RBP14.33□□□□□ -0.11
CNOT3-201ENST00000221232 ACTR8Q9H981 624 aa14.33□□□□□ -0.11
CNOT3-201ENST00000221232 HPS4Q9NQG7 708 aa14.33□□□□□ -0.11
CNOT3-201ENST00000221232 SLC25A37Q9NYZ2 338 aa14.33□□□□□ -0.11
CNOT3-201ENST00000221232 PKD2L2Q9NZM6 624 aa14.33□□□□□ -0.11
CNOT3-201ENST00000221232 PCDHB3Q9Y5E6 796 aa14.33□□□□□ -0.11
CNOT3-201ENST00000221232 PCDHB1Q9Y5F3 818 aa14.33□□□□□ -0.11
CNOT3-201ENST00000221232 A0A1W2PPW3 197 aa14.33□□□□□ -0.12
CNOT3-201ENST00000221232 NPIPB15A6NHN6 443 aaPredicted RBP14.33□□□□□ -0.12
CNOT3-201ENST00000221232 H0Y858 1186 aa14.33□□□□□ -0.12
CNOT3-201ENST00000221232 RGS14O43566 566 aa14.33□□□□□ -0.12
CNOT3-201ENST00000221232 PRKD3O94806 890 aa14.33□□□□□ -0.12
CNOT3-201ENST00000221232 CST1P01037 141 aa14.33□□□□□ -0.12
CNOT3-201ENST00000221232 TRBC1P01850 177 aa14.33□□□□□ -0.12
CNOT3-201ENST00000221232 EFNA1P20827 205 aaPredicted RBP14.33□□□□□ -0.12
CNOT3-201ENST00000221232 ARSFP54793 590 aa14.33□□□□□ -0.12
CNOT3-201ENST00000221232 TUBA4AP68366 448 aa14.33□□□□□ -0.12
CNOT3-201ENST00000221232 ILF2Q12905 390 aaKnown RBP14.33□□□□□ -0.12
CNOT3-201ENST00000221232 MTA1Q13330 715 aa14.33□□□□□ -0.12
CNOT3-201ENST00000221232 INO80DQ53TQ3 878 aaPredicted RBP14.33□□□□□ -0.12
CNOT3-201ENST00000221232 SNX20Q7Z614 316 aa14.33□□□□□ -0.12
CNOT3-201ENST00000221232 PATL1Q86TB9 770 aaKnown RBP14.33□□□□□ -0.12
CNOT3-201ENST00000221232 BBS7Q8IWZ6 715 aa14.33□□□□□ -0.12
CNOT3-201ENST00000221232 SLC43A3Q8NBI5 491 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms