RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 ZNF682O95780 498 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 IFNA14P01570 189 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 CYP17A1P05093 508 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 ZNF30P17039 623 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 CCNA2P20248 432 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 HNF1BP35680 557 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 SLC6A11P48066 632 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 RPL14P50914 215 aaKnown RBP9.27□□□□□ -0.93
CCDC113-201ENST00000219299 ITGA1P56199 1179 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 SIX1Q15475 284 aaPredicted RBP9.27□□□□□ -0.93
CCDC113-201ENST00000219299 TSNQ15631 228 aaKnown RBP9.27□□□□□ -0.93
CCDC113-201ENST00000219299 SF1Q15637 639 aaKnown RBP9.27□□□□□ -0.93
CCDC113-201ENST00000219299 DUSP6Q16828 381 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 TIMM50Q3ZCQ8 353 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 LDLRAP1Q5SW96 308 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 MPP7Q5T2T1 576 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 EMC10Q5UCC4 262 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 PAQR3Q6TCH7 311 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 GPR149Q86SP6 731 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 ZDHHC13Q8IUH4 622 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 SLC44A2Q8IWA5 706 aaPredicted RBP9.27□□□□□ -0.93
CCDC113-201ENST00000219299 NAT14Q8WUY8 206 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 ZSCAN5AQ9BUG6 496 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 C8orf33Q9H7E9 229 aaPredicted RBP9.27□□□□□ -0.93
CCDC113-201ENST00000219299 NENFQ9UMX5 172 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 CYP8B1Q9UNU6 501 aa9.27□□□□□ -0.93
CCDC113-201ENST00000219299 FAM47E-STBD1D6RA91 191 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 TK2O00142 265 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 PEX11AO75192 247 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 RPS6KA3P51812 740 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 MAPK10P53779 464 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 BNIP1Q12981 228 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 ANGPT1Q15389 498 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 PGS1Q32NB8 556 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 RNF220Q5VTB9 566 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 NADSYN1Q6IA69 706 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 KLHL17Q6TDP4 642 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 ULK2Q8IYT8 1036 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 UBASH3BQ8TF42 649 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 MAGEB10Q96LZ2 347 aaPredicted RBP9.26□□□□□ -0.93
CCDC113-201ENST00000219299 RNF145Q96MT1 663 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 TDRD1Q9BXT4 1180 aaKnown RBP9.26□□□□□ -0.93
CCDC113-201ENST00000219299 TPSD1Q9BZJ3 242 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 AP4B1Q9Y6B7 739 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 PTGES3LE9PB15 166 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 H0Y858 1186 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 TPD52L2O43399 206 aaKnown RBP9.26□□□□□ -0.93
CCDC113-201ENST00000219299 EDF1O60869 148 aaKnown RBP9.26□□□□□ -0.93
CCDC113-201ENST00000219299 AHSGP02765 367 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 HOXA9P31269 272 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 GJA4P35212 333 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 GNPDA1P46926 289 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 PXNP49023 591 aaPredicted RBP9.26□□□□□ -0.93
CCDC113-201ENST00000219299 PKNOX1P55347 436 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 IGDCC3Q8IVU1 814 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 KBTBD2Q8IY47 623 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 CPXM2Q8N436 756 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 CLP1Q92989 425 aaKnown RBP9.26□□□□□ -0.93
CCDC113-201ENST00000219299 ZNF778Q96MU6 729 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 DPY30Q9C005 99 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 POLR1BQ9H9Y6 1135 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 DNAJC28Q9NX36 388 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 ZDHHC3Q9NYG2 299 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 ZNF180Q9UJW8 692 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 PSMD12O00232 456 aaPredicted RBP9.26□□□□□ -0.93
CCDC113-201ENST00000219299 HS6ST1O60243 411 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 SERPINA6P08185 405 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 COX4I1P13073 169 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 ETV3P41162 512 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 HK2P52789 917 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 LIPMQ5VYY2 423 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 KBTBD6Q86V97 674 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 VN1R2Q8NFZ6 395 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 STARD8Q92502 1023 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 LRIG1Q96JA1 1093 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 ZNF514Q96K75 400 aaPredicted RBP9.26□□□□□ -0.93
CCDC113-201ENST00000219299 RHBGQ9H310 441 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 CLK4Q9HAZ1 481 aaKnown RBP9.26□□□□□ -0.93
CCDC113-201ENST00000219299 TMEM165Q9HC07 324 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 TMEM216Q9P0N5 145 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 ENOPH1Q9UHY7 261 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 PLLPQ9Y342 182 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 PRKAB1Q9Y478 270 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 DRGXA6NNA5 263 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 PLK4O00444 970 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 VPS4BO75351 444 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 GABBR2O75899 941 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 FESP07332 822 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 LAMP2P13473 410 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 GNSP15586 552 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 CCT3P49368 545 aaKnown RBP9.26□□□□□ -0.93
CCDC113-201ENST00000219299 USP39Q53GS9 565 aaKnown RBP9.26□□□□□ -0.93
CCDC113-201ENST00000219299 PERM1Q5SV97 790 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 ARHGAP12Q8IWW6 846 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 CYP4X1Q8N118 509 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 AMER2Q8N7J2 671 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 PPP1R14BQ96C90 147 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 TUBGCP5Q96RT8 1024 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 HDHD2Q9H0R4 259 aa9.26□□□□□ -0.93
CCDC113-201ENST00000219299 INTS10Q9NVR2 710 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms