RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 ASTE1Q2TB18 679 aaPredicted RBP10.29□□□□□ -0.76
VCL-201ENST00000211998 NOMO2Q5JPE7 1267 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 GPR158Q5T848 1215 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 OGFRL1Q5TC84 451 aaPredicted RBP10.29□□□□□ -0.76
VCL-201ENST00000211998 CES5AQ6NT32 575 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 FSTL5Q8N475 847 aaPredicted RBP10.29□□□□□ -0.76
VCL-201ENST00000211998 TMEM161BQ8NDZ6 487 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 OR5J2Q8NH18 312 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 HEXDCQ8WVB3 486 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 BSNDQ8WZ55 320 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 SLC7A6OSQ96CW6 309 aaPredicted RBP10.29□□□□□ -0.76
VCL-201ENST00000211998 DHRS1Q96LJ7 313 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 ACO2Q99798 780 aaKnown RBP10.29□□□□□ -0.76
VCL-201ENST00000211998 ASAH2Q9NR71 780 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 CHRAC1Q9NRG0 131 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 NDUFAF4Q9P032 175 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 CDRT1O95170 752 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 UQCRC1P31930 480 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 KIR3DL1P43629 444 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 TTPAP49638 278 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 FKBP1BP68106 108 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 MAP2K5Q13163 448 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 DCST1Q5T197 706 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 DCAF12L1Q5VU92 463 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 TRMT10BQ6PF06 316 aaKnown RBP10.29□□□□□ -0.76
VCL-201ENST00000211998 ASRGL1Q7L266 308 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 PIAS4Q8N2W9 510 aaPredicted RBP10.29□□□□□ -0.76
VCL-201ENST00000211998 HJURPQ8NCD3 748 aaPredicted RBP10.29□□□□□ -0.76
VCL-201ENST00000211998 DEDD2Q8WXF8 326 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 C12orf66Q96MD2 445 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 PRICKLE1Q96MT3 831 aaPredicted RBP10.29□□□□□ -0.76
VCL-201ENST00000211998 HNRNPABQ99729 332 aaKnown RBP10.29□□□□□ -0.76
VCL-201ENST00000211998 AIFM2Q9BRQ8 373 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 LRRC3Q9BY71 257 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 RANBP3Q9H6Z4 567 aaPredicted RBP10.29□□□□□ -0.76
VCL-201ENST00000211998 ATP13A3Q9H7F0 1226 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 ASB3Q9Y575 518 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 DLGAP1O14490 977 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 PRMT3O60678 531 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 TLX1P31314 330 aaPredicted RBP10.29□□□□□ -0.76
VCL-201ENST00000211998 CSTF2P33240 577 aaKnown RBP eCLIP10.29□□□□□ -0.76
VCL-201ENST00000211998 CCR10P46092 362 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 CRYBB1P53674 252 aaPredicted RBP10.29□□□□□ -0.76
VCL-201ENST00000211998 AIF1P55008 147 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 RHBDL3P58872 404 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 RPS3AP61247 264 aaKnown RBP10.29□□□□□ -0.76
VCL-201ENST00000211998 ECM1Q16610 540 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 LRRN1Q6UXK5 716 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 DCDC5Q6ZRR9 648 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 OAFQ86UD1 273 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 TRAPPC5Q8IUR0 188 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 MMAAQ8IVH4 418 aaKnown RBP10.29□□□□□ -0.76
VCL-201ENST00000211998 ZNF567Q8N184 647 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 GOLM1Q8NBJ4 401 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 FAM98AQ8NCA5 519 aaKnown RBP10.29□□□□□ -0.76
VCL-201ENST00000211998 AZIN2Q96A70 460 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 HCN3Q9P1Z3 774 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 CDC14AQ9UNH5 594 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 NR2E3Q9Y5X4 410 aa10.29□□□□□ -0.76
VCL-201ENST00000211998 MAP2P11137 1827 aaKnown RBP10.29□□□□□ -0.76
VCL-201ENST00000211998 TRIM64A6NGJ6 449 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 TRIM64BA6NI03 449 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 PRODHO43272 600 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 RP2O75695 350 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 LHCGRP22888 699 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 CLCQ05315 142 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 BIKQ13323 160 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 CPTPQ5TA50 214 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 DOK6Q6PKX4 331 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 C4orf32Q8N8J7 132 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 FEM1CQ96JP0 617 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 KCNC2Q96PR1 638 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 FUZQ9BT04 418 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 SDCBP2Q9H190 292 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 CDT1Q9H211 546 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 XPNPEP1Q9NQW7 623 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 FARSBQ9NSD9 589 aaKnown RBP10.28□□□□□ -0.76
VCL-201ENST00000211998 FBXL21Q9UKT6 434 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 DERAQ9Y315 318 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 TRAV6A0A075B6T7 132 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 GDF10P55107 478 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 EEFSECP57772 596 aaKnown RBP10.28□□□□□ -0.76
VCL-201ENST00000211998 EIF5AP63241 154 aaKnown RBP10.28□□□□□ -0.76
VCL-201ENST00000211998 HSPA14Q0VDF9 509 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 PPP1R8Q12972 351 aaKnown RBP10.28□□□□□ -0.76
VCL-201ENST00000211998 XKR6Q5GH73 641 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 EMC10Q5UCC4 262 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 ZNF767PQ75MW2 155 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 ZFPM1Q8IX07 1006 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 LRRC52Q8N7C0 313 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 GATA6Q92908 595 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 RAD51AP1Q96B01 352 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 LRRC58Q96CX6 371 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 SEMA3GQ9NS98 782 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 PAK1IP1Q9NWT1 392 aaPredicted RBP10.28□□□□□ -0.76
VCL-201ENST00000211998 MTMR10Q9NXD2 777 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 HCN2Q9UL51 889 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 PADI2Q9Y2J8 665 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 COL1A2P08123 1366 aa10.28□□□□□ -0.76
VCL-201ENST00000211998 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms