RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 MAP4K5Q9Y4K4 846 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 CLCA3PQ9Y6N3 262 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 EP300Q09472 2414 aaPredicted RBP11.2□□□□□ -0.62
PKP2-201ENST00000070846 SETD1AO15047 1707 aaKnown RBP11.2□□□□□ -0.62
PKP2-201ENST00000070846 IGLON5A6NGN9 336 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 B3GALT2O43825 422 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 PDE9AO76083 593 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 ZCCHC18P0CG32 403 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 CEBPBP17676 345 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 GLDCP23378 1020 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 RXRGP48443 463 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 ERVFC1P60507 584 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 TNK2Q07912 1038 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 CST6Q15828 149 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 VWA5B1Q5TIE3 1220 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 IZUMO2Q6UXV1 221 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 USP53Q70EK8 1073 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 OFCC1Q8IZS5 231 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 AVL9Q8NBF6 648 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 BHLHE22Q8NFJ8 381 aaPredicted RBP11.2□□□□□ -0.62
PKP2-201ENST00000070846 PYDC1Q8WXC3 89 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 RAB7BQ96AH8 199 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 LRIG1Q96JA1 1093 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 EFCAB11Q9BUY7 163 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 FNDC11Q9BVV2 318 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 FZD3Q9NPG1 666 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 HRASLS2Q9NWW9 162 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 ABI3Q9P2A4 366 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 CORO2BQ9UQ03 480 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 NUP188Q5SRE5 1749 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 MYH14Q7Z406 1995 aaKnown RBP11.2□□□□□ -0.62
PKP2-201ENST00000070846 MID1O15344 667 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 PGLSO95336 258 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 AP1S2P56377 157 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 KHDRBS2Q5VWX1 349 aaKnown RBP11.2□□□□□ -0.62
PKP2-201ENST00000070846 PIM3Q86V86 326 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 TERB1Q8NA31 727 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 OR2T12Q8NG77 320 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 RP9Q8TA86 221 aaKnown RBP11.2□□□□□ -0.62
PKP2-201ENST00000070846 VANGL1Q8TAA9 524 aaPredicted RBP11.2□□□□□ -0.62
PKP2-201ENST00000070846 TMEM79Q9BSE2 394 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 SLC46A2Q9BY10 475 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 WBP1LQ9NX94 342 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 HCN3Q9P1Z3 774 aa11.2□□□□□ -0.62
PKP2-201ENST00000070846 PRR5-ARHGAP8B1AHC4 643 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 MCIDASD6RGH6 385 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 PEX1O43933 1283 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 AHSGP02765 367 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 ASGR2P07307 311 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 UROSP10746 265 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 JUNDP17535 347 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 POLR2CP19387 275 aaPredicted RBP11.19□□□□□ -0.62
PKP2-201ENST00000070846 GDF5P43026 501 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 CCR8P51685 355 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 RAB8AP61006 207 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 ARHGAP8P85298 464 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 HMGCS1Q01581 520 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 CYP1B1Q16678 543 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 QPCTQ16769 361 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 VPS26BQ4G0F5 336 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 DCAF12L1Q5VU92 463 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 CYP2U1Q7Z449 544 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 NXPE1Q8N323 547 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.19□□□□□ -0.62
PKP2-201ENST00000070846 DLGAP2Q9P1A6 1054 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 KDM3BQ7LBC6 1761 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 RNGTTO60942 597 aaKnown RBP11.19□□□□□ -0.62
PKP2-201ENST00000070846 ARSAP15289 507 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 ZNF33AQ06730 810 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 OASLQ15646 514 aaKnown RBP11.19□□□□□ -0.62
PKP2-201ENST00000070846 SUSD1Q6UWL2 747 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 ZYG11AQ6WRX3 759 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 CADM2Q8N3J6 435 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 CPSF7Q8N684 471 aaKnown RBP11.19□□□□□ -0.62
PKP2-201ENST00000070846 WDR92Q96MX6 357 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 CDK15Q96Q40 435 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 VPS35Q96QK1 796 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 NPAS2Q99743 824 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 FAM83CQ9BQN1 747 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 OGDHLQ9ULD0 1010 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 SAMHD1Q9Y3Z3 626 aaKnown RBP11.19□□□□□ -0.62
PKP2-201ENST00000070846 PCDHB3Q9Y5E6 796 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 SUV39H1O43463 412 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 TSPAN6O43657 245 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 SEC24AO95486 1093 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 EDN1P05305 212 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 PSMB9P28065 219 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 HNF1BP35680 557 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 HSD17B2P37059 387 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 BNC1Q01954 994 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 ELOCQ15369 112 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 RBM20Q5T481 1227 aaKnown RBP11.19□□□□□ -0.62
PKP2-201ENST00000070846 GALPQ9UBC7 116 aa11.19□□□□□ -0.62
PKP2-201ENST00000070846 APOBEC3BQ9UH17 382 aaKnown RBP11.19□□□□□ -0.62
PKP2-201ENST00000070846 A8MUI8 341 aa11.18□□□□□ -0.62
PKP2-201ENST00000070846 REM1O75628 298 aa11.18□□□□□ -0.62
PKP2-201ENST00000070846 IL6P05231 212 aa11.18□□□□□ -0.62
PKP2-201ENST00000070846 BDKRB1P46663 353 aa11.18□□□□□ -0.62
PKP2-201ENST00000070846 PTCHD3Q3KNS1 767 aa11.18□□□□□ -0.62
PKP2-201ENST00000070846 SLC8B1Q6J4K2 584 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms