RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ADPRMQ3LIE5 342 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 PARP15Q460N3 678 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 DET1Q7L5Y6 550 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 EFL1Q7Z2Z2 1120 aaKnown RBP13.79□□□□□ -0.2
USH1C-201ENST00000005226 GALNT10Q86SR1 603 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 NETO1Q8TDF5 533 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 SLC13A3Q8WWT9 602 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 RHBDF1Q96CC6 855 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 ZNF347Q96SE7 839 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 HEPHQ9BQS7 1158 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 C1QTNF3Q9BXJ4 246 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 UGT2B28Q9BY64 529 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 FNIP2Q9P278 1114 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 ENPP5Q9UJA9 477 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 PTPRDP23468 1912 aa13.79□□□□□ -0.2
USH1C-201ENST00000005226 GOLGA8CPA6NN73 597 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 DIRAS1O95057 198 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 EPOP01588 193 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 MYCLP1P12525 358 aaPredicted RBP13.78□□□□□ -0.2
USH1C-201ENST00000005226 PCMT1P22061 227 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 HOXC8P31273 242 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 SLC6A4P31645 630 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 OCA2Q04671 838 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 VAC14Q08AM6 782 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 GTF2H2Q13888 395 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 PON2Q15165 354 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 SMN1Q16637 294 aaKnown RBP13.78□□□□□ -0.2
USH1C-201ENST00000005226 MAPKAPK3Q16644 382 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 GTF2H2CQ6P1K8 395 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 FRA10AC1Q70Z53 315 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 DSG4Q86SJ6 1040 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 ANKRD46Q86W74 232 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 FATE1Q969F0 183 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 ABHD8Q96I13 439 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 KATNAL1Q9BW62 490 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 ABCG8Q9H221 673 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 SEPT3Q9UH03 358 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 PNMA8BQ9ULN7 279 aaPredicted RBP13.78□□□□□ -0.2
USH1C-201ENST00000005226 C2orf81A6NN90 581 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 ARNTLO00327 626 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 JRKO75564 520 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 TACR2P21452 398 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 TRIM32Q13049 653 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 TRIP4Q15650 581 aaPredicted RBP13.78□□□□□ -0.2
USH1C-201ENST00000005226 CARTPTQ16568 116 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 FAM110CQ1W6H9 321 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 LINGO4Q6UY18 593 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 SLC22A15Q8IZD6 547 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 CADM3Q8N126 398 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 LIX1Q8N485 282 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 GLMNQ92990 594 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 UBE2FQ969M7 185 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 CINPQ9BW66 212 aaPredicted RBP13.78□□□□□ -0.2
USH1C-201ENST00000005226 APOL5Q9BWW9 433 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.78□□□□□ -0.2
USH1C-201ENST00000005226 ELOVL2Q9NXB9 296 aa13.78□□□□□ -0.2
USH1C-201ENST00000005226 RBMX2Q9Y388 322 aaKnown RBP13.78□□□□□ -0.2
USH1C-201ENST00000005226 PATJQ8NI35 1801 aa13.77□□□□□ -0.2
USH1C-201ENST00000005226 ELOVL7A1L3X0 281 aa13.77□□□□□ -0.2
USH1C-201ENST00000005226 TLR5O60602 858 aa13.77□□□□□ -0.2
USH1C-201ENST00000005226 NADKO95544 446 aaPredicted RBP13.77□□□□□ -0.2
USH1C-201ENST00000005226 SERPINA1P01009 418 aa13.77□□□□□ -0.2
USH1C-201ENST00000005226 OR1G1P47890 313 aa13.77□□□□□ -0.2
USH1C-201ENST00000005226 MRPL19P49406 292 aaKnown RBP13.77□□□□□ -0.2
USH1C-201ENST00000005226 CDK5R2Q13319 367 aa13.77□□□□□ -0.2
USH1C-201ENST00000005226 DCP2Q8IU60 420 aaKnown RBP13.77□□□□□ -0.2
USH1C-201ENST00000005226 MCOLN3Q8TDD5 553 aa13.77□□□□□ -0.2
USH1C-201ENST00000005226 GIPC2Q8TF65 315 aa13.77□□□□□ -0.2
USH1C-201ENST00000005226 FAR1Q8WVX9 515 aa13.77□□□□□ -0.2
USH1C-201ENST00000005226 CRISPLD1Q9H336 500 aa13.77□□□□□ -0.2
USH1C-201ENST00000005226 TMEFF2Q9UIK5 374 aaPredicted RBP13.77□□□□□ -0.2
USH1C-201ENST00000005226 ZFP37Q9Y6Q3 630 aaPredicted RBP13.77□□□□□ -0.2
USH1C-201ENST00000005226 PMF1-BGLAPU3KQ54 211 aa13.77□□□□□ -0.2
USH1C-201ENST00000005226 A0A0U1RQF3 1178 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 MOXD2PA6NHM9 499 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 ZNF99A8MXY4 864 aaPredicted RBP13.77□□□□□ -0.21
USH1C-201ENST00000005226 UGT2B11O75310 529 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 OXA1LQ15070 435 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 TAF1AQ15573 450 aaPredicted RBP13.77□□□□□ -0.21
USH1C-201ENST00000005226 MORN1Q5T089 497 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 RPL3LQ92901 407 aaKnown RBP13.77□□□□□ -0.21
USH1C-201ENST00000005226 MAGED4Q96JG8 741 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 FEM1AQ9BSK4 669 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 RIBC2Q9H4K1 309 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 GORASP2Q9H8Y8 452 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 PALMDQ9NP74 551 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 DNMT3BQ9UBC3 853 aaKnown RBP13.77□□□□□ -0.21
USH1C-201ENST00000005226 KLQ9UEF7 1012 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 CBX4O00257 560 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 KPNA4O00629 521 aaPredicted RBP13.77□□□□□ -0.21
USH1C-201ENST00000005226 PRMT5O14744 637 aaPredicted RBP13.77□□□□□ -0.21
USH1C-201ENST00000005226 STX7O15400 261 aaKnown RBP13.77□□□□□ -0.21
USH1C-201ENST00000005226 INSIG1O15503 277 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 NPPAP01160 153 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 ALDH2P05091 517 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 CTPS1P17812 591 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 LPOP22079 712 aaPredicted RBP13.77□□□□□ -0.21
USH1C-201ENST00000005226 CD6P30203 668 aa13.77□□□□□ -0.21
USH1C-201ENST00000005226 TMED10P49755 219 aaKnown RBP13.77□□□□□ -0.21
USH1C-201ENST00000005226 SGSHP51688 502 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms