RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Mterf1aQ8CHZ9 379 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Kremen2Q8K1S7 461 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Dclre1cQ8K4J0 705 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Med17Q8VCD5 649 aaKnown RBP13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 L2hgdhQ91YP0 464 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Ppp1r16aQ923M0 524 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Il23aQ9EQ14 196 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Cdh17Q9R100 827 aa13.22□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Eif2b3B1AUN2 452 aaKnown RBP13.21□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Sec22bO08547 215 aaKnown RBP13.21□□□□□ -0.29
Rnf4-204ENSMUST00000182047 P01679 107 aa13.21□□□□□ -0.29
Rnf4-204ENSMUST00000182047 CkmP07310 381 aa13.21□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Rc3h2P0C090 1187 aaKnown RBP13.21□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Gria2P23819 883 aa13.21□□□□□ -0.29
Rnf4-204ENSMUST00000182047 WarsP32921 481 aa13.21□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Gli1P47806 1111 aa13.21□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Rab33aP97950 237 aa13.21□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Rapgefl1Q68EF8 662 aa13.21□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Itln1bQ80ZA0 313 aa13.21□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Thoc5Q8BKT7 683 aaKnown RBP13.21□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Serpinb9dQ8BMT0 377 aa13.21□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Ccdc32Q8BS39 179 aa13.21□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Olfr448Q8VES9 310 aa13.21□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Zcchc12Q9CZA5 402 aa13.21□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Trpm6Q8CIR4 2028 aa13.21□□□□□ -0.29
Rnf4-204ENSMUST00000182047 Vmn2r94E9PZK8 818 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Zfp169E9Q3R6 731 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Glyatl3E9Q5L8 290 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Ceacam3E9Q6J4 706 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Ncam2O35136 837 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Pou4f1P17208 421 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Nedd8P29595 81 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Adrb1P34971 466 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 HmgclP38060 325 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Rpl26P61255 145 aaKnown RBP13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 BmxP97504 651 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Aqp1Q02013 269 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 A1bgQ19LI2 512 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Cpne9Q1RLL3 553 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Col28a1Q2UY11 1141 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 InavaQ7TN12 663 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Clec4a3Q8JZX6 237 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Rtn4rl1Q8K0S5 445 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Micu1Q8VCX5 477 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Exd2Q8VEG4 650 aaKnown RBP13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Sult5a1Q91X36 291 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Slc44a3Q921V7 656 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Bcl7aQ9CXE2 210 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Htra3Q9D236 459 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 CtsrQ9JIA9 334 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Grb14Q9JLM9 538 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Hao2Q9NYQ2 353 aa13.21□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Olfr839-ps1A0A1D5RMH6 312 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Zmynd12A2BGJ5 363 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Gm10406A6NAS4 205 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Gm3373A6NAS7 205 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Gm3298E9PW80 205 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Erich1E9PY43 332 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Slc4a5E9Q3M5 1116 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Tsga10ipF7A1F0 157 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Gm3667K7N757 205 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 RhoP15409 348 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Dlx2P40764 332 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Eci1P42125 289 aaKnown RBP13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Stx1bP61264 288 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Gm3558Q5FWC9 205 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Il15raQ60819 263 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Lrrc8eQ66JT1 795 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Naa50Q6PGB6 169 aaKnown RBP13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Them6Q80ZW2 207 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Adipor2Q8BQS5 386 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Usb1Q91W78 267 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Golm1Q91XA2 393 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Atoh8Q99NA2 322 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Lrrc4Q99PH1 652 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Unc50Q9CQ61 259 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Q9D1F3 157 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Tnip3A0A1D5RMN0 279 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Mgat4eA6H684 439 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Skint11A7XV14 364 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Vmn2r46L7N282 809 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Krt4P07744 525 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Hspa1bP17879 642 aaKnown RBP13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Pabpc1P29341 636 aaKnown RBP13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Pdha2P35487 391 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Bcl6P41183 707 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 F8a1Q00558 380 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Nol9Q3TZX8 714 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Usp22Q5DU02 525 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Gas6Q61592 674 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Hspa1aQ61696 641 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Otop2Q80SX5 563 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Peli3Q8BXR6 445 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Fam221bQ8C627 487 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Samd7Q8C8Y5 445 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Erich5Q8K0S2 362 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Epm2aip1Q8VEH5 606 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Anxa13Q99JG3 317 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 DhddsQ99KU1 333 aa13.2□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Lrrc18Q9CQ07 262 aa13.2□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms